RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA849172" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA849172 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5060953 5060953 PRJNA849172_P_NODE_74764_length_264_cov_16.450262_g74404_i0 PRJNA849172 74764 264 16.450262 43.42869168 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 77.4 1.41e-16   NR CAF1326126.1 1234261 g74404 i0 56.3 3.23863636363636 71 31 80.7 0 24 236 1 71 CAF1326126.1 unnamed protein product [Didymodactylos carnosus] diamond 855 77.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
8489575 8489575 PRJNA849172_P_NODE_5707_length_921_cov_38.991745_g5415_i0 PRJNA849172 5707 921 38.991745 359.11397145 Metazoa 33208 Rotifera other_Eukaryota 170 2.25e-47   NR RNA11554.1 10195 g5415 i0 39.4 4.29315960912052 274 141 86.6 10 905 108 4 260 RNA11554.1 serine protease 27-like [Brachionus plicatilis] diamond 3954 170 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
12316558 12316558 PRJNA849172_P_NODE_7870_length_777_cov_33.872159_g7534_i0 PRJNA849172 7870 777 33.872159 263.18667543 Adineta ricciae 249248 Rotifera other_Eukaryota 402 5.21e-140   NR CAF1220590.1 249248 g7534 i0 95.1 0.795366795366795 206 10 79.5 0 4 621 4 209 CAF1220590.1 unnamed protein product [Adineta ricciae] diamond 618 402 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
27623704 27623704 PRJNA849172_P_NODE_23344_length_425_cov_23.997159_g22985_i0 PRJNA849172 23344 425 23.997159 101.98792575 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 53.5 4.07e-5   NR CAF4584132.1 392030 g22985 i0 45.9 1.29176470588235 61 32 42.4 1 1 180 295 355 CAF4584132.1 unnamed protein product [Rotaria magnacalcarata] diamond 549 53.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
28318151 28318151 PRJNA849172_P_NODE_66146_length_274_cov_1.358209_g65786_i0 PRJNA849172 66146 274 1.358209 3.72149266 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 90.1 1.22e-18   NR CAF2510592.1 2762512 g65786 i0 50 1.97080291970803 90 45 98.5 0 270 1 390 479 CAF2510592.1 unnamed protein product [Rotaria sp. Silwood2] diamond 540 90.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
28507642 28507642 PRJNA849172_P_NODE_145347_length_201_cov_13.312500_g144987_i0 PRJNA849172 145347 201 13.3125 26.758125 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 50.1 4.32e-6   NR CAF1358887.1 1234261 g144987 i0 61.3 0.462686567164179 31 12 46.3 0 3 95 42 72 CAF1358887.1 unnamed protein product, partial [Didymodactylos carnosus] diamond 93 50.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;