RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA849172", tax_phylum = "Phixviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Phixviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA849172 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22910493 22910493 PRJNA849172_P_NODE_6958_length_830_cov_7.107001_g6636_i0 PRJNA849172 6958 830 7.107001 58.9881083 Microvirus sp. 2202559 Viruses Viruses 110 1.4e-25   NR QJB20403.1 2202559 g6636 i0 47 0.42289156626506 117 57 42.3 1 277 627 35 146 QJB20403.1 MAG: internal scaffolding protein [Microvirus sp.] diamond 351 110 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microvirus sp.
26959753 26959753 PRJNA849172_P_NODE_25342_length_408_cov_3.752239_g24983_i0 PRJNA849172 25342 408 3.752239 15.30913512 Microvirus sp. 2202559 Viruses Viruses 62.8 5.68e-10   NR QJB19603.1 2202559 g24983 i0 48.3 0.426470588235294 58 30 42.6 0 183 10 1 58 QJB19603.1 MAG: nonstructural protein [Microvirus sp.] diamond 174 62.8 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microvirus sp.
31477130 31477130 PRJNA849172_P_NODE_45536_length_309_cov_3.961864_g45176_i0 PRJNA849172 45536 309 3.961864 12.24215976 Microviridae sp. 2202644 Viruses Viruses 82.8 6.63e-16   NR UOF78980.1 2202644 g45176 i0 51.9 2.01941747572816 104 47 99 2 308 3 207 309 UOF78980.1 major capsid protein [Microviridae sp.] diamond 624 82.8 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;