RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA849172", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Kitrinoviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA849172 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27695296 27695296 PRJNA849172_P_NODE_6844_length_837_cov_20.133508_g6525_i0 PRJNA849172 6844 837 20.133508 168.51746196 Deltaflexivirus 2169569 Viruses Viruses 52.4 9.45e-4   NR YP_009508365.1 1788309 g6525 i0 35.9 1.04301075268817 64 41 22.9 0 751 560 176 239 YP_009508365.1 hypothetical protein [Sclerotinia sclerotiorum deltaflexivirus 1] diamond 873 52.8 0.992424242424242 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae Deltaflexivirus Deltaflexivirus sclerotiniae
30663477 30663477 PRJNA849172_P_NODE_2733_length_1339_cov_25.017378_g2540_i0 PRJNA849172 2733 1339 25.017378 334.98269142 Viruses 10239 Viruses Viruses 176 1e-43   NR WPR18883.1 3076995 g2540 i0 33.8 1.56609410007468 334 202 74.2 11 210 1202 691 1008 WPR18883.1 MAG: RNA-dependent RNA polymerase, partial [Virgaviridae-like virus 7] diamond 2097 177 0.994350282485876 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae   Virgaviridae-like virus 7
32363010 32363010 PRJNA849172_P_NODE_7139_length_819_cov_22.435657_g6817_i0 PRJNA849172 7139 819 22.435657 183.74803083 Sclerotinia sclerotiorum deltaflexivirus 3S2 2867097 Viruses Viruses 57.4 7.67e-6   NR QYU59136.1 2867097 g6817 i0 30.4 0.58974358974359 161 101 57.5 7 27 497 39 192 QYU59136.1 hypothetical protein [Sclerotinia sclerotiorum deltaflexivirus 3S2] diamond 483 57.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae   Sclerotinia sclerotiorum deltaflexivirus 3S2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;