RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA849172" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA849172 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30000134 30000134 PRJNA849172_P_NODE_62811_length_277_cov_12.764706_g62451_i0 PRJNA849172 62811 277 12.764706 35.35823562 root 1 Root_unresolved Root_unresolved 46.2 0.00312   NR MBF0430632.1 2725311 g62451 i0 45.8 1.68953068592058 48 25 52 1 193 50 30 76 MBF0430632.1 hypothetical protein [Fibrobacteria bacterium] diamond 468 46.2 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
32521183 32521183 PRJNA849172_P_NODE_107499_length_242_cov_3.431953_g107139_i0 PRJNA849172 107499 242 3.431953 8.30532626 Fibrobacterota bacterium 2052160 Bacteria Bacteria 106 4.79e-25   NR MEN9355004.1 2052160 g107139 i0 65.4 0.966942148760331 78 27 96.7 0 238 5 182 259 MEN9355004.1 hypothetical protein [Fibrobacterota bacterium] diamond 234 106 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;