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contig_metadata

17 rows where bioproject = "PRJNA849172" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA849172 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4664816 4664816 PRJNA849172_P_NODE_44044_length_312_cov_42.171548_g43684_i0 PRJNA849172 44044 312 42.171548 131.57522976 Chytridiomycetes 451435 Fungi Fungi 171 3.5599999999999996e-47   NR KAI9011104.1 109897 g43684 i0 82.4 2.95192307692308 102 18 98.1 0 1 306 627 728 KAI9011104.1 Thiolase, N-terminal domain-containing protein [Gaertneriomyces semiglobifer] diamond 921 171 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Gaertneriomyces Gaertneriomyces semiglobifer
12313471 12313471 PRJNA849172_P_NODE_109050_length_241_cov_11.761905_g108690_i0 PRJNA849172 109050 241 11.761905 28.34619105 Spizellomyces punctatus 109760 Fungi Fungi 126 1.26e-24   NTclustered gi|1027025241|ref|XM_016756493.1| 645134 g108690 i0 88.462 1.30705394190871 104 12 43 0 135 238 1092 989 Spizellomyces punctatus DAOM BR117 uncharacterized protein (SPPG_08336), mRNA blastn 315 126 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
18686943 18686943 PRJNA849172_P_NODE_21935_length_439_cov_14.543716_g21576_i0 PRJNA849172 21935 439 14.543716 63.84691324 Gromochytrium mamkaevae 1486924 Fungi Fungi 267 1.39e-66   NTclustered gi|612507318|gb|KF586842.1| 1486924 g21576 i0 88.393 62.4851936218679 224 22 73 4 219 439 5408 5630 Gromochytrium mamkaevae strain CALU x-51 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 27431 267 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Gromochytriales Gromochytriaceae Gromochytrium Gromochytrium mamkaevae
19084251 19084251 PRJNA849172_P_NODE_53635_length_289_cov_5.171296_g53275_i0 PRJNA849172 53635 289 5.171296 14.94504544 Rhizophlyctis 64515 Fungi Fungi 529 1.01e-145   NTclustered gi|82398309|gb|DQ273787.1| 64517 g53275 i0 99.654 97.1280276816609 289 1 100 0 1 289 347 59 Rhizophlyctis rosea isolate AFTOL-ID 43 28S ribosomal RNA gene, partial sequence blastn 28070 534 0.99063670411985 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
19961943 19961943 PRJNA849172_P_NODE_15796_length_524_cov_18.084257_g15437_i0 PRJNA849172 15796 524 18.084257 94.76150668 Chytridiomycota 4761 Fungi Fungi 161 3.09e-47   NR KAI9101177.1 1117335 g15437 i0 58.1 14.3301526717557 148 44 84.7 2 520 77 7 136 KAI9101177.1 hypothetical protein DFS34DRAFT_592067 [Phlyctochytrium arcticum] diamond 7509 161 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium arcticum
26841896 26841896 PRJNA849172_P_NODE_37381_length_337_cov_3.037879_g37022_i0 PRJNA849172 37381 337 3.037879 10.23765223 root 1 Root_unresolved Root_unresolved 70.1 1.9e-11   NR KAI8896558.1 382532 g37022 i0 51.7 3.3026706231454 89 31 72.1 5 335 93 153 237 KAI8896558.1 hypothetical protein BC833DRAFT_553640 [Globomyces pollinis-pini] diamond 1113 70.5 0.994326241134752 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Globomycetaceae Globomyces Globomyces pollinis-pini
28349713 28349713 PRJNA849172_P_NODE_65326_length_274_cov_13.681592_g64966_i0 PRJNA849172 65326 274 13.681592 37.48756208 Synchytrium endobioticum 286115 Fungi Fungi 59.3 4.35e-8   NR TPX40568.1 286115 g64966 i0 62 0.547445255474453 50 18 54.7 1 92 241 189 237 TPX40568.1 hypothetical protein SeMB42_g05942 [Synchytrium endobioticum] diamond 150 59.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium endobioticum
28476005 28476005 PRJNA849172_P_NODE_10986_length_643_cov_11.671930_g10634_i0 PRJNA849172 10986 643 11.67193 75.0505099 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 159 4.89e-41   NR KAH9260821.1 1357716 g10634 i0 42.2 0.984447900466563 211 116 96.1 3 26 643 533 742 KAH9260821.1 hypothetical protein BASA81_001288 [Batrachochytrium salamandrivorans] diamond 633 159 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
29431357 29431357 PRJNA849172_P_NODE_85729_length_254_cov_8.232044_g85369_i0 PRJNA849172 85729 254 8.232044 20.90939176 Fungi 4751 Fungi Fungi 70.5 3.91e-13   NR KAI9019013.1 82268 g85369 i0 74 2.18503937007874 50 12 59.1 1 2 151 86 134 KAI9019013.1 eukaryotic translation initiation factor 1A, X-chromosomal [Hyaloraphidium curvatum] diamond 555 70.9 0.994358251057828 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
29580815 29580815 PRJNA849172_P_NODE_74750_length_264_cov_25.282723_g74390_i0 PRJNA849172 74750 264 25.282723 66.74638872 Rhizophlyctis rosea 64517 Fungi Fungi 64.7 1.51e-10   NR KAJ3046761.1 64517 g74390 i0 54.4 1.29545454545455 57 26 64.8 0 262 92 118 174 KAJ3046761.1 60S ribosomal protein L20 [Rhizophlyctis rosea] diamond 342 64.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
30465895 30465895 PRJNA849172_P_NODE_66293_length_273_cov_7.910000_g65933_i0 PRJNA849172 66293 273 7.91 21.5943 Chytriomyces confervae 246404 Fungi Fungi 72 2.79e-12   NR TPX65528.1 246404 g65933 i0 44.7 2.04395604395604 94 44 98.9 4 273 4 788 877 TPX65528.1 hypothetical protein CcCBS67573_g08089 [Chytriomyces confervae] diamond 558 72 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces confervae
30505572 30505572 PRJNA849172_P_NODE_14413_length_552_cov_18.613779_g14054_i0 PRJNA849172 14413 552 18.613779 102.74806008 Opisthokonta 33154 Fungi Fungi 246 2.26e-79   NR KAI9009822.1 109897 g14054 i0 64.1 12.7065217391304 167 59 90.8 1 3 503 80 245 KAI9009822.1 thioredoxin-like protein [Gaertneriomyces semiglobifer] diamond 7014 247 0.995951417004049 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Gaertneriomyces Gaertneriomyces semiglobifer
31002788 31002788 PRJNA849172_P_NODE_33534_length_354_cov_22.743772_g33175_i0 PRJNA849172 33534 354 22.743772 80.51295288 Neocallimastix lanati (nom. inval.) 2767002 Fungi Fungi 103 1.1399999999999999e-23   NR KAG4090814.1 2767002 g33175 i0 62.5 3.42372881355932 80 28 66.9 2 353 117 247 325 KAG4090814.1 eukaryotic translation initiation factor 3 subunit I-like protein [Neocallimastix lanati (nom. inval.)] diamond 1212 103 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix lanati (nom. inval.)
31698318 31698318 PRJNA849172_P_NODE_133857_length_215_cov_7.626761_g133497_i0 PRJNA849172 133857 215 7.626761 16.39753615 Hyaloraphidium curvatum 82268 Fungi Fungi 72 7.33e-13   NR KAI9026238.1 82268 g133497 i0 86.5 1.53488372093023 37 5 51.6 0 214 104 271 307 KAI9026238.1 putative mitochondrial ADP/ATP translocase [Hyaloraphidium curvatum] diamond 330 72 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
31919796 31919796 PRJNA849172_P_NODE_41417_length_321_cov_15.068548_g41057_i0 PRJNA849172 41417 321 15.068548 48.37003908 Rhizophlyctis rosea 64517 Fungi Fungi 51.6 9.51e-6   NR KAJ3056649.1 64517 g41057 i0 75 0.794392523364486 36 8 32.7 1 255 151 36 71 KAJ3056649.1 hypothetical protein HK097_005324 [Rhizophlyctis rosea] diamond 255 51.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
31959711 31959711 PRJNA849172_P_NODE_20097_length_460_cov_24.726098_g19738_i0 PRJNA849172 20097 460 24.726098 113.7400508 Fungi 4751 Fungi Fungi 128 8.66e-33   NR KAI9017116.1 109897 g19738 i0 48.5 10.9760869565217 132 56 84.8 3 63 452 42 163 KAI9017116.1 hypothetical protein BC832DRAFT_543703 [Gaertneriomyces semiglobifer] diamond 5049 129 0.992248062015504 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Gaertneriomyces Gaertneriomyces semiglobifer
32276387 32276387 PRJNA849172_P_NODE_129258_length_222_cov_7.838926_g128898_i0 PRJNA849172 129258 222 7.838926 17.40241572 Chytridiomycota 4761 Fungi Fungi 56.2 4.53e-7   NR KAJ3047975.1 64517 g128898 i0 49.2 2.47297297297297 61 31 82.4 0 221 39 232 292 KAJ3047975.1 hypothetical protein HK097_010993 [Rhizophlyctis rosea] diamond 549 56.6 0.992932862190813 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;