RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA849172" and tax_phylum = "Candidatus Dormiibacterota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA849172 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3386994 3386994 PRJNA849172_P_NODE_41603_length_321_cov_3.016129_g41243_i0 PRJNA849172 41603 321 3.016129 9.68177409 Bacillati 1783272 Bacteria Bacteria 147 5.88e-41   NR HEV3232006.1 2052315 g41243 i0 76.3 3.60747663551402 97 23 90.7 0 31 321 27 123 HEV3232006.1 ABC transporter ATP-binding protein [Candidatus Dormiibacterota bacterium] diamond 1158 147 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29296976 29296976 PRJNA849172_P_NODE_53969_length_289_cov_2.115741_g53609_i0 PRJNA849172 53969 289 2.115741 6.11449149 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 143 6.61e-42   NR HEY0493228.1 2052315 g53609 i0 87.3 0.820069204152249 79 10 82 0 3 239 39 117 HEY0493228.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 237 143 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
30971254 30971254 PRJNA849172_P_NODE_60294_length_280_cov_11.840580_g59934_i0 PRJNA849172 60294 280 11.84058 33.153624 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 155 1.37e-44   NR HEY0493227.1 2052315 g59934 i0 77.5 0.953571428571429 89 20 95.4 0 3 269 200 288 HEY0493227.1 PHB depolymerase family esterase [Candidatus Dormiibacterota bacterium] diamond 267 155 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
32867477 32867477 PRJNA849172_P_NODE_92260_length_250_cov_3.197740_g91900_i0 PRJNA849172 92260 250 3.19774 7.99435 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 144 2.57e-41   NR HLQ97773.1 2052315 g91900 i0 100 0.864 72 0 86.4 0 2 217 131 202 HLQ97773.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 216 144 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;