RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA849172" and tax_phylum = "Candidatus Blackallbacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Blackallbacteria · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA849172 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27316240 27316240 PRJNA849172_P_NODE_120703_length_231_cov_3.949367_g120343_i0 PRJNA849172 120703 231 3.949367 9.12303777 Bacteria 2 Bacteria Bacteria 51.6 2.21e-5   NR PIW49927.1 2014260 g120343 i0 42.3 3.01298701298701 78 35 93.5 3 8 223 255 328 PIW49927.1 MAG: hypothetical protein COW20_04565 [bacterium (Candidatus Blackallbacteria) CG13_big_fil_rev_8_21_14_2_50_49_14] diamond 696 51.6 1 Bacteria Bacteria candidate phyla   Candidatus Blackallbacteria         bacterium (Candidatus Blackallbacteria) CG13_big_fil_rev_8_21_14_2_50_49_14

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;