contig_metadata
58 rows where bioproject = "PRJNA849172", tax_kingdom = "Pseudomonadati" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 835291 | 835291 | PRJNA849172_P_NODE_143781_length_203_cov_5.923077_g143421_i0 | PRJNA849172 | 143781 | 203 | 5.923077 | 12.02384631 | Leptospira mgodei | 3235172 | Bacteria | Bacteria | 176 | 1.01e-39 | NTclustered | gi|2777195838|gb|CP162139.1| | 3235172 | g143421 | i0 | 83.246 | 0.940886699507389 | 191 | 32 | 94 | 0 | 1 | 191 | 2942578 | 2942768 | Leptospira mgodei strain WS4.C2 chromosome 1, complete sequence | blastn | 191 | 176 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira mgodei | ||
| 837141 | 837141 | PRJNA849172_P_NODE_70401_length_269_cov_2.387755_g70041_i0 | PRJNA849172 | 70401 | 269 | 2.387755 | 6.42306095 | Treponema vincentii | 69710 | Bacteria | Bacteria | 364 | 2.7899999999999998e-96 | NTclustered | gi|2265136109|gb|CP051197.1| | 69710 | g70041 | i0 | 91.111 | 8.48327137546468 | 270 | 22 | 100 | 2 | 1 | 269 | 475863 | 476131 | Treponema vincentii strain OMZ 802 chromosome, complete genome | blastn | 2282 | 364 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 2507429 | 2507429 | PRJNA849172_P_NODE_118322_length_233_cov_3.875000_g117962_i0 | PRJNA849172 | 118322 | 233 | 3.875 | 9.02875 | Treponema | 157 | Bacteria | Bacteria | 255 | 1.48e-63 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g117962 | i0 | 86.58 | 5.86695278969957 | 231 | 31 | 99 | 0 | 1 | 231 | 1581569 | 1581339 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 1367 | 255 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 2508359 | 2508359 | PRJNA849172_P_NODE_68082_length_271_cov_12.363636_g67722_i0 | PRJNA849172 | 68082 | 271 | 12.363636 | 33.50545356 | Treponema | 157 | Bacteria | Bacteria | 490 | 4.44e-134 | NTclustered | gi|2034589463|gb|CP050497.1| | 69710 | g67722 | i0 | 99.262 | 195.169741697417 | 271 | 2 | 100 | 0 | 1 | 271 | 216817 | 217087 | Treponema vincentii strain OMZ 806 chromosome, complete genome | blastn | 52891 | 490 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 3385174 | 3385174 | PRJNA849172_P_NODE_113963_length_237_cov_3.207317_g113603_i0 | PRJNA849172 | 113963 | 237 | 3.207317 | 7.60134129 | Treponema vincentii | 69710 | Bacteria | Bacteria | 438 | 1.4e-118 | NTclustered | gi|2265115921|gb|CP051153.1| | 69710 | g113603 | i0 | 100 | 3 | 237 | 0 | 100 | 0 | 1 | 237 | 2572007 | 2571771 | Treponema vincentii strain OMZ 862 chromosome, complete genome | blastn | 711 | 438 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 4665824 | 4665824 | PRJNA849172_P_NODE_78164_length_261_cov_3.648936_g77804_i0 | PRJNA849172 | 78164 | 261 | 3.648936 | 9.52372296 | Treponema sp. OMZ 857 | 1643513 | Bacteria | Bacteria | 455 | 1.55e-123 | NTclustered | gi|2265110357|gb|CP051147.1| | 1643513 | g77804 | i0 | 98.084 | 9.3639846743295 | 261 | 5 | 100 | 0 | 1 | 261 | 23938 | 24198 | Treponema sp. OMZ 857 chromosome, complete genome | blastn | 2444 | 455 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 857 | ||
| 5060440 | 5060440 | PRJNA849172_P_NODE_29904_length_375_cov_3.403974_g29545_i0 | PRJNA849172 | 29904 | 375 | 3.403974 | 12.7649025 | unclassified Treponema | 2638727 | Bacteria | Bacteria | 76.3 | 1.83e-13 | NR | WP_253708301.1 | 2638727 | g29545 | i0 | 57.6 | 0.472 | 59 | 25 | 47.2 | 0 | 1 | 177 | 276 | 334 | WP_253708301.1 MULTISPECIES: formylglycine-generating enzyme family protein [unclassified Treponema] | diamond | 177 | 76.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | |||
| 7213448 | 7213448 | PRJNA849172_P_NODE_143886_length_203_cov_5.484615_g143526_i0 | PRJNA849172 | 143886 | 203 | 5.484615 | 11.13376845 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|2621705858|emb|OY763920.1| | 2791017 | g143526 | i0 | 86.275 | 0.251231527093596 | 51 | 5 | 25 | 2 | 117 | 167 | 1101617 | 1101569 | MAG: Sphaerochaetaceae bacterium isolate d5506382-6fb0-4ee2-9b9e-b33663e62a62 genome assembly, chromosome: 1 | blastn | 51 | 54.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 7610133 | 7610133 | PRJNA849172_P_NODE_135406_length_213_cov_6.307143_g135046_i0 | PRJNA849172 | 135406 | 213 | 6.307143 | 13.43421459 | Treponema | 157 | Bacteria | Bacteria | 383 | 5.8499999999999996e-102 | NTclustered | gi|1996291085|gb|CP027017.1| | 58231 | g135046 | i0 | 99.061 | 11.7276995305164 | 213 | 2 | 100 | 0 | 1 | 213 | 43882 | 43670 | Treponema medium strain T19 chromosome, complete genome | blastn | 2498 | 383 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 7610359 | 7610359 | PRJNA849172_P_NODE_21906_length_440_cov_2.942779_g21547_i0 | PRJNA849172 | 21906 | 440 | 2.942779 | 12.9482276 | Treponema | 157 | Bacteria | Bacteria | 732 | 0 | NTclustered | gi|2034589463|gb|CP050497.1| | 69710 | g21547 | i0 | 97.436 | 22.4318181818182 | 429 | 11 | 98 | 0 | 1 | 429 | 686608 | 687036 | Treponema vincentii strain OMZ 806 chromosome, complete genome | blastn | 9870 | 734 | 0.997275204359673 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 8490003 | 8490003 | PRJNA849172_P_NODE_71087_length_268_cov_3.835897_g70727_i0 | PRJNA849172 | 71087 | 268 | 3.835897 | 10.28020396 | Treponema sp. OMZ 803 | 120682 | Bacteria | Bacteria | 219 | 2.2899999999999998e-52 | NTclustered | gi|2265127813|gb|CP051195.1| | 120682 | g70727 | i0 | 85.068 | 5.5410447761194 | 221 | 26 | 82 | 6 | 17 | 236 | 906596 | 906810 | Treponema sp. OMZ 803 strain BF2M chromosome, complete genome | blastn | 1485 | 219 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 803 | ||
| 9765058 | 9765058 | PRJNA849172_P_NODE_64808_length_275_cov_3.084158_g64448_i0 | PRJNA849172 | 64808 | 275 | 3.084158 | 8.4814345 | Treponema sp. OMZ 906 | 2563662 | Bacteria | Bacteria | 481 | 2.72e-131 | NTclustered | gi|2265130757|gb|CP051196.1| | 2563662 | g64448 | i0 | 98.182 | 11.8836363636364 | 275 | 5 | 100 | 0 | 1 | 275 | 492143 | 491869 | Treponema sp. OMZ 906 chromosome, complete genome | blastn | 3268 | 481 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 906 | ||
| 11038576 | 11038576 | PRJNA849172_P_NODE_128609_length_223_cov_8.666667_g128249_i0 | PRJNA849172 | 128609 | 223 | 8.666667 | 19.32666741 | Treponema brennaborense | 81028 | Bacteria | Bacteria | 171 | 5.24e-38 | NTclustered | gi|332179772|gb|CP002696.1| | 906968 | g128249 | i0 | 80.804 | 196.533632286996 | 224 | 37 | 100 | 4 | 1 | 223 | 429830 | 430048 | Treponema brennaborense DSM 12168, complete genome | blastn | 43827 | 171 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema brennaborense | ||
| 11040859 | 11040859 | PRJNA849172_P_NODE_71469_length_268_cov_2.102564_g71109_i0 | PRJNA849172 | 71469 | 268 | 2.102564 | 5.63487152 | Treponema medium | 58231 | Bacteria | Bacteria | 261 | 3.75e-65 | NTclustered | gi|1996291085|gb|CP027017.1| | 58231 | g71109 | i0 | 89.372 | 2.35074626865672 | 207 | 22 | 77 | 0 | 10 | 216 | 2241678 | 2241472 | Treponema medium strain T19 chromosome, complete genome | blastn | 630 | 261 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 11436229 | 11436229 | PRJNA849172_P_NODE_34389_length_350_cov_7.097473_g34030_i0 | PRJNA849172 | 34389 | 350 | 7.097473 | 24.8411555 | Treponema | 157 | Bacteria | Bacteria | 457 | 6e-124 | NTclustered | gi|1996291085|gb|CP027017.1| | 58231 | g34030 | i0 | 91.124 | 13.5971428571429 | 338 | 29 | 96 | 1 | 14 | 350 | 1417408 | 1417071 | Treponema medium strain T19 chromosome, complete genome | blastn | 4759 | 460 | 0.993478260869565 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 13591408 | 13591408 | PRJNA849172_P_NODE_88971_length_252_cov_2.586592_g88611_i0 | PRJNA849172 | 88971 | 252 | 2.586592 | 6.51821184 | Treponema denticola | 158 | Bacteria | Bacteria | 438 | 1.5e-118 | NTclustered | gi|2265181513|gb|CP051634.1| | 158 | g88611 | i0 | 98.016 | 14.8849206349206 | 252 | 5 | 100 | 0 | 1 | 252 | 168817 | 169068 | Treponema denticola strain OMZ 850 chromosome, complete genome | blastn | 3751 | 438 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 13986011 | 13986011 | PRJNA849172_P_NODE_146931_length_200_cov_4.818898_g146571_i0 | PRJNA849172 | 146931 | 200 | 4.818898 | 9.637796 | Leptospira idonii | 1193500 | Bacteria | Bacteria | 137 | 3.8999999999999994e-36 | NR | WP_135760230.1 | 1193500 | g146571 | i0 | 100 | 0.99 | 66 | 0 | 99 | 0 | 200 | 3 | 44 | 109 | WP_135760230.1 glutamine--fructose-6-phosphate transaminase (isomerizing) [Leptospira idonii] | diamond | 198 | 137 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira idonii | ||
| 14865879 | 14865879 | PRJNA849172_P_NODE_96572_length_248_cov_1.514286_g96212_i0 | PRJNA849172 | 96572 | 248 | 1.514286 | 3.75542928 | Treponema sp. OMZ 906 | 2563662 | Bacteria | Bacteria | 442 | 1.1399999999999995e-119 | NTclustered | gi|2265130757|gb|CP051196.1| | 2563662 | g96212 | i0 | 98.79 | 1 | 248 | 3 | 100 | 0 | 1 | 248 | 281925 | 281678 | Treponema sp. OMZ 906 chromosome, complete genome | blastn | 248 | 442 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 906 | ||
| 15260214 | 15260214 | PRJNA849172_P_NODE_146112_length_201_cov_4.398438_g145752_i0 | PRJNA849172 | 146112 | 201 | 4.398438 | 8.84086038 | Treponema | 157 | Bacteria | Bacteria | 344 | 2.5799999999999998e-90 | NTclustered | gi|2265168914|gb|CP051304.1| | 158 | g145752 | i0 | 97.512 | 5 | 201 | 5 | 100 | 0 | 1 | 201 | 2578222 | 2578022 | Treponema denticola strain CD-1 chromosome, complete genome | blastn | 1005 | 344 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 15261111 | 15261111 | PRJNA849172_P_NODE_97192_length_248_cov_0.868571_g96832_i0 | PRJNA849172 | 97192 | 248 | 0.868571 | 2.15405608 | Treponema | 157 | Bacteria | Bacteria | 425 | 1.15e-114 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g96832 | i0 | 97.581 | 3 | 248 | 6 | 100 | 0 | 1 | 248 | 1838356 | 1838603 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 744 | 425 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 16140161 | 16140161 | PRJNA849172_P_NODE_78533_length_261_cov_2.085106_g78173_i0 | PRJNA849172 | 78533 | 261 | 2.085106 | 5.44212666 | Treponema vincentii | 69710 | Bacteria | Bacteria | 483 | 7.12e-132 | NTclustered | gi|2265136109|gb|CP051197.1| | 69710 | g78173 | i0 | 100 | 8.96551724137931 | 261 | 0 | 100 | 0 | 1 | 261 | 2356738 | 2356478 | Treponema vincentii strain OMZ 802 chromosome, complete genome | blastn | 2340 | 483 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 16535705 | 16535705 | PRJNA849172_P_NODE_93653_length_249_cov_5.750000_g93293_i0 | PRJNA849172 | 93653 | 249 | 5.75 | 14.3175 | Leptospira | 171 | Bacteria | Bacteria | 453 | 5.29e-123 | NTclustered | gi|2330606|emb|Z98588.1| | 172 | g93293 | i0 | 99.598 | 104 | 249 | 0 | 100 | 1 | 1 | 249 | 482 | 235 | Leptospira biflexa 16S ribosomal RNA, mutant 3/1994 | blastn | 25896 | 453 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira biflexa | ||
| 17412615 | 17412615 | PRJNA849172_P_NODE_113034_length_238_cov_2.830303_g112674_i0 | PRJNA849172 | 113034 | 238 | 2.830303 | 6.73612114 | Treponema sp. OMZ 803 | 120682 | Bacteria | Bacteria | 412 | 8.51e-111 | NTclustered | gi|2265127813|gb|CP051195.1| | 120682 | g112674 | i0 | 97.899 | 8.98739495798319 | 238 | 5 | 100 | 0 | 1 | 238 | 1707797 | 1707560 | Treponema sp. OMZ 803 strain BF2M chromosome, complete genome | blastn | 2139 | 412 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 803 | ||
| 17412935 | 17412935 | PRJNA849172_P_NODE_123614_length_229_cov_2.794872_g123254_i0 | PRJNA849172 | 123614 | 229 | 2.794872 | 6.40025688 | Treponema denticola | 158 | Bacteria | Bacteria | 418 | 1.7499999999999995e-112 | NTclustered | gi|2265163189|gb|CP051302.1| | 158 | g123254 | i0 | 99.563 | 12.4934497816594 | 229 | 1 | 100 | 0 | 1 | 229 | 992232 | 992460 | Treponema denticola strain OMZ 853 chromosome, complete genome | blastn | 2861 | 418 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 19961047 | 19961047 | PRJNA849172_P_NODE_119216_length_232_cov_5.257862_g118856_i0 | PRJNA849172 | 119216 | 232 | 5.257862 | 12.19823984 | Treponema sp. OMZ 857 | 1643513 | Bacteria | Bacteria | 372 | 1.3999999999999998e-98 | NTclustered | gi|2265110357|gb|CP051147.1| | 1643513 | g118856 | i0 | 95.671 | 4.00862068965517 | 231 | 10 | 99 | 0 | 2 | 232 | 1539991 | 1539761 | Treponema sp. OMZ 857 chromosome, complete genome | blastn | 930 | 372 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 857 | ||
| 21238708 | 21238708 | PRJNA849172_P_NODE_53277_length_290_cov_1.783410_g52917_i0 | PRJNA849172 | 53277 | 290 | 1.78341 | 5.171889 | Treponema denticola | 158 | Bacteria | Bacteria | 379 | 1.08e-100 | NTclustered | gi|2323013626|gb|CP109619.1| | 158 | g52917 | i0 | 96.121 | 18.9758620689655 | 232 | 9 | 80 | 0 | 59 | 290 | 775502 | 775733 | Treponema denticola strain KCOM 3500 chromosome, complete genome | blastn | 5503 | 379 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 22511747 | 22511747 | PRJNA849172_P_NODE_130998_length_220_cov_4.102041_g130638_i0 | PRJNA849172 | 130998 | 220 | 4.102041 | 9.0244902 | Treponema denticola | 158 | Bacteria | Bacteria | 401 | 1.6799999999999993e-107 | NTclustered | gi|2265172126|gb|CP051522.1| | 158 | g130638 | i0 | 99.545 | 14.8 | 220 | 1 | 100 | 0 | 1 | 220 | 2521127 | 2520908 | Treponema denticola strain OMZ 910 chromosome, complete genome | blastn | 3256 | 401 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 25061346 | 25061346 | PRJNA849172_P_NODE_138140_length_210_cov_4.270073_g137780_i0 | PRJNA849172 | 138140 | 210 | 4.270073 | 8.9671533 | Treponema denticola | 158 | Bacteria | Bacteria | 383 | 5.75e-102 | NTclustered | gi|2265199313|gb|CP058624.1| | 158 | g137780 | i0 | 99.524 | 22.8904761904762 | 210 | 1 | 100 | 0 | 1 | 210 | 1524411 | 1524620 | Treponema denticola strain OMZ 854 chromosome, complete genome | blastn | 4807 | 383 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 26643111 | 26643111 | PRJNA849172_P_NODE_104181_length_244_cov_1.801170_g103821_i0 | PRJNA849172 | 104181 | 244 | 1.80117 | 4.3948548 | Treponema sp. | 166 | Bacteria | Bacteria | 137 | 2.71e-36 | NR | MFC2330835.1 | 166 | g103821 | i0 | 79 | 0.995901639344262 | 81 | 17 | 99.6 | 0 | 244 | 2 | 368 | 448 | MFC2330835.1 pallilysin-related adhesin [Treponema sp.] | diamond | 243 | 137 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27117790 | 27117790 | PRJNA849172_P_NODE_108702_length_242_cov_0.923077_g108342_i0 | PRJNA849172 | 108702 | 242 | 0.923077 | 2.23384634 | Treponema sp. | 166 | Bacteria | Bacteria | 160 | 3.86e-46 | NR | MFC2330537.1 | 166 | g108342 | i0 | 98.8 | 0.991735537190083 | 80 | 1 | 99.2 | 0 | 242 | 3 | 78 | 157 | MFC2330537.1 DegT/DnrJ/EryC1/StrS family aminotransferase [Treponema sp.] | diamond | 240 | 160 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27220956 | 27220956 | PRJNA849172_P_NODE_144102_length_203_cov_4.753846_g143742_i0 | PRJNA849172 | 144102 | 203 | 4.753846 | 9.65030738 | Treponema | 157 | Bacteria | Bacteria | 66.6 | 5.76e-12 | NR | MDR0410928.1 | 166 | g143742 | i0 | 60.4 | 7.72906403940887 | 48 | 19 | 70.9 | 0 | 59 | 202 | 1 | 48 | MDR0410928.1 single-stranded DNA-binding protein [Treponema sp.] | diamond | 1569 | 66.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27339473 | 27339473 | PRJNA849172_P_NODE_57703_length_284_cov_1.639810_g57343_i0 | PRJNA849172 | 57703 | 284 | 1.63981 | 4.6570604 | Leptonema illini DSM 21528 | 929563 | Bacteria | Bacteria | 65.1 | 3.85e-11 | NR | EHQ05053.1 | 929563 | g57343 | i0 | 31.9 | 0.961267605633803 | 91 | 60 | 94 | 1 | 7 | 273 | 14 | 104 | EHQ05053.1 hypothetical protein Lepil_0346 [Leptonema illini DSM 21528] | diamond | 273 | 65.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptonema | Leptonema illini | ||
| 27339506 | 27339506 | PRJNA849172_P_NODE_89143_length_252_cov_2.251397_g88783_i0 | PRJNA849172 | 89143 | 252 | 2.251397 | 5.67352044 | Treponema medium | 58231 | Bacteria | Bacteria | 132 | 6.89e-34 | NR | WP_016523342.1 | 58231 | g88783 | i0 | 77.1 | 2.97619047619048 | 83 | 19 | 98.8 | 0 | 252 | 4 | 375 | 457 | WP_016523342.1 S1C family serine protease [Treponema medium] | diamond | 750 | 132 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 27347842 | 27347842 | PRJNA849172_P_NODE_139823_length_208_cov_4.207407_g139463_i0 | PRJNA849172 | 139823 | 208 | 4.207407 | 8.75140656 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 96.3 | 3.700000000000001e-22 | NR | KAB2930079.1 | 183 | g139463 | i0 | 72.1 | 6.95192307692308 | 68 | 19 | 98.1 | 0 | 3 | 206 | 151 | 218 | KAB2930079.1 MAG: GIY-YIG nuclease family protein [Leptonema illini] | diamond | 1446 | 96.7 | 0.995863495346432 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptonema | Leptonema illini | ||
| 27560243 | 27560243 | PRJNA849172_P_NODE_92944_length_250_cov_1.531073_g92584_i0 | PRJNA849172 | 92944 | 250 | 1.531073 | 3.8276825 | Treponema sp. | 166 | Bacteria | Bacteria | 84.7 | 2.32e-18 | NR | MDY5831433.1 | 166 | g92584 | i0 | 51.3 | 2.868 | 80 | 39 | 96 | 0 | 244 | 5 | 71 | 150 | MDY5831433.1 hypothetical protein [Treponema sp.] | diamond | 717 | 84.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 27907402 | 27907402 | PRJNA849172_P_NODE_148145_length_199_cov_4.317460_g147785_i0 | PRJNA849172 | 148145 | 199 | 4.31746 | 8.5917454 | Treponema vincentii | 69710 | Bacteria | Bacteria | 79.3 | 7.2e-16 | NR | WP_253818062.1 | 69710 | g147785 | i0 | 58.5 | 0.979899497487437 | 65 | 26 | 98 | 1 | 197 | 3 | 30 | 93 | WP_253818062.1 Hachiman antiphage defense system protein HamA [Treponema vincentii] | diamond | 195 | 79.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 27939404 | 27939404 | PRJNA849172_P_NODE_43585_length_314_cov_3.510373_g43225_i0 | PRJNA849172 | 43585 | 314 | 3.510373 | 11.02257122 | Treponema sp. | 166 | Bacteria | Bacteria | 47 | 0.00258 | NR | MCL2210797.1 | 166 | g43225 | i0 | 38.6 | 0.668789808917197 | 70 | 42 | 65.9 | 1 | 8 | 214 | 292 | 361 | MCL2210797.1 phosphoadenosine phosphosulfate reductase family protein [Treponema sp.] | diamond | 210 | 47 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28002598 | 28002598 | PRJNA849172_P_NODE_27965_length_388_cov_2.863492_g27606_i0 | PRJNA849172 | 27965 | 388 | 2.863492 | 11.11034896 | Treponema pectinovorum | 164 | Bacteria | Bacteria | 136 | 3.52e-34 | NR | WP_147614001.1 | 164 | g27606 | i0 | 97 | 0.510309278350515 | 66 | 2 | 51 | 0 | 2 | 199 | 1058 | 1123 | WP_147614001.1 type I restriction-modification system endonuclease [Treponema pectinovorum] | diamond | 198 | 136 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema pectinovorum | ||
| 28160481 | 28160481 | PRJNA849172_P_NODE_52485_length_291_cov_2.169725_g52125_i0 | PRJNA849172 | 52485 | 291 | 2.169725 | 6.31389975 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 76.3 | 8.73e-14 | NR | NBU96780.1 | 2053615 | g52125 | i0 | 83.7 | 0.443298969072165 | 43 | 7 | 44.3 | 0 | 131 | 3 | 6 | 48 | NBU96780.1 hypothetical protein [Spirochaetia bacterium] | diamond | 129 | 76.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 29013083 | 29013083 | PRJNA849172_P_NODE_132628_length_217_cov_5.409722_g132268_i0 | PRJNA849172 | 132628 | 217 | 5.409722 | 11.73909674 | Treponema lecithinolyticum | 53418 | Bacteria | Bacteria | 122 | 3.01e-32 | NR | WP_021686847.1 | 53418 | g132268 | i0 | 81.3 | 1.76958525345622 | 64 | 12 | 88.5 | 0 | 2 | 193 | 198 | 261 | WP_021686847.1 hypothetical protein [Treponema lecithinolyticum] | diamond | 384 | 122 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema lecithinolyticum | ||
| 29360154 | 29360154 | PRJNA849172_P_NODE_28289_length_385_cov_10.778846_g27930_i0 | PRJNA849172 | 28289 | 385 | 10.778846 | 41.4985571 | Leptospira meyeri | 29508 | Bacteria | Bacteria | 249 | 2.78e-78 | NR | WP_004789274.1 | 29508 | g27930 | i0 | 99.2 | 0.981818181818182 | 126 | 1 | 98.2 | 0 | 3 | 380 | 184 | 309 | WP_004789274.1 FHA domain-containing protein [Leptospira meyeri] | diamond | 378 | 249 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira meyeri | ||
| 29865270 | 29865270 | PRJNA849172_P_NODE_40651_length_324_cov_5.418327_g40291_i0 | PRJNA849172 | 40651 | 324 | 5.418327 | 17.55537948 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 123 | 1.85e-31 | NR | MBU0956021.1 | 2202144 | g40291 | i0 | 59.6 | 1.00925925925926 | 109 | 43 | 100 | 1 | 1 | 324 | 16 | 124 | MBU0956021.1 Gfo/Idh/MocA family oxidoreductase [Spirochaetota bacterium] | diamond | 327 | 123 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 29896959 | 29896959 | PRJNA849172_P_NODE_102091_length_245_cov_1.813953_g101731_i0 | PRJNA849172 | 102091 | 245 | 1.813953 | 4.44418485 | Leptospira idonii | 1193500 | Bacteria | Bacteria | 162 | 1.41e-47 | NR | WP_281277617.1 | 1193500 | g101731 | i0 | 100 | 0.991836734693878 | 81 | 0 | 99.2 | 0 | 245 | 3 | 47 | 127 | WP_281277617.1 sulfite exporter TauE/SafE family protein [Leptospira idonii] | diamond | 243 | 162 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira idonii | ||
| 29991754 | 29991754 | PRJNA849172_P_NODE_94431_length_249_cov_2.079545_g94071_i0 | PRJNA849172 | 94431 | 249 | 2.079545 | 5.17806705 | Spirochaetaceae bacterium | 1898206 | Bacteria | Bacteria | 91.7 | 2.41e-19 | NR | TVR50942.1 | 1898206 | g94071 | i0 | 56.1 | 6.91566265060241 | 82 | 35 | 98.8 | 1 | 247 | 2 | 436 | 516 | TVR50942.1 MAG: hypothetical protein EA426_20455 [Spirochaetaceae bacterium] | diamond | 1722 | 91.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 30244530 | 30244530 | PRJNA849172_P_NODE_148372_length_198_cov_7.864000_g148012_i0 | PRJNA849172 | 148372 | 198 | 7.864 | 15.57072 | Treponema sp. OMZ 9 | 166 | Bacteria | Bacteria | 60.8 | 8.41e-9 | NR | WP_253824602.1 | 2563662 | g148012 | i0 | 79.4 | 1.03030303030303 | 34 | 7 | 51.5 | 0 | 19 | 120 | 250 | 283 | WP_253824602.1 ATP-binding protein [Treponema sp. OMZ 906] | diamond | 204 | 60.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 906 | ||
| 30537118 | 30537118 | PRJNA849172_P_NODE_123293_length_229_cov_3.564103_g122933_i0 | PRJNA849172 | 123293 | 229 | 3.564103 | 8.16179587 | Treponema | 157 | Bacteria | Bacteria | 62 | 9.48e-11 | NR | TAH48746.1 | 166 | g122933 | i0 | 56 | 1.31004366812227 | 50 | 21 | 65.5 | 1 | 40 | 189 | 4 | 52 | TAH48746.1 MAG: hypothetical protein EWM51_10765 [Treponema sp.] | diamond | 300 | 62 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 30813118 | 30813118 | PRJNA849172_P_NODE_62914_length_277_cov_5.485294_g62554_i0 | PRJNA849172 | 62914 | 277 | 5.485294 | 15.19426438 | Spirochaetaceae bacterium | 1898206 | Bacteria | Bacteria | 48.5 | 1.95e-4 | NR | MBO5692023.1 | 1898206 | g62554 | i0 | 52.3 | 0.476534296028881 | 44 | 21 | 47.7 | 0 | 3 | 134 | 109 | 152 | MBO5692023.1 lecithin retinol acyltransferase family protein [Spirochaetaceae bacterium] | diamond | 132 | 48.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 30853041 | 30853041 | PRJNA849172_P_NODE_125974_length_227_cov_3.519481_g125614_i0 | PRJNA849172 | 125974 | 227 | 3.519481 | 7.98922187 | PVC group | 1783257 | Bacteria | Bacteria | 56.2 | 5.31e-7 | NR | MDE0217711.1 | 1898206 | g125614 | i0 | 44.3 | 5.65638766519824 | 70 | 37 | 91.2 | 2 | 221 | 15 | 308 | 376 | MDE0217711.1 Ig domain-containing protein [Spirochaetaceae bacterium] | diamond | 1284 | 56.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 31066126 | 31066126 | PRJNA849172_P_NODE_141455_length_206_cov_4.556391_g141095_i0 | PRJNA849172 | 141455 | 206 | 4.556391 | 9.38616546 | Spirochaetales bacterium | 2026792 | Bacteria | Bacteria | 79.7 | 1.34e-15 | NR | MFA5851073.1 | 2026792 | g141095 | i0 | 56.1 | 0.961165048543689 | 66 | 29 | 96.1 | 0 | 7 | 204 | 197 | 262 | MFA5851073.1 glycosyltransferase [Spirochaetales bacterium] | diamond | 198 | 79.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 31097359 | 31097359 | PRJNA849172_P_NODE_147235_length_200_cov_4.094488_g146875_i0 | PRJNA849172 | 147235 | 200 | 4.094488 | 8.188976 | Treponema lecithinolyticum | 53418 | Bacteria | Bacteria | 130 | 1.93e-33 | NR | WP_021686056.1 | 53418 | g146875 | i0 | 97 | 0.99 | 66 | 2 | 99 | 0 | 198 | 1 | 333 | 398 | WP_021686056.1 6-hydroxymethylpterin diphosphokinase MptE-like protein [Treponema lecithinolyticum] | diamond | 198 | 130 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema lecithinolyticum | ||
| 31160232 | 31160232 | PRJNA849172_P_NODE_107815_length_242_cov_2.579882_g107455_i0 | PRJNA849172 | 107815 | 242 | 2.579882 | 6.24331444 | Treponema putidum | 221027 | Bacteria | Bacteria | 65.5 | 3.22e-10 | NR | WP_255818605.1 | 221027 | g107455 | i0 | 45.7 | 1.83471074380165 | 70 | 34 | 86.8 | 1 | 233 | 24 | 300 | 365 | WP_255818605.1 hypothetical protein [Treponema putidum] | diamond | 444 | 65.5 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema putidum | ||
| 31761545 | 31761545 | PRJNA849172_P_NODE_130777_length_220_cov_4.925170_g130417_i0 | PRJNA849172 | 130777 | 220 | 4.92517 | 10.835374 | Leptospira meyeri | 29508 | Bacteria | Bacteria | 154 | 4.0399999999999996e-42 | NR | WP_004786481.1 | 29508 | g130417 | i0 | 100 | 2.98636363636364 | 73 | 0 | 99.5 | 0 | 219 | 1 | 479 | 551 | WP_004786481.1 PAS domain S-box protein [Leptospira meyeri] | diamond | 657 | 154 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira meyeri | ||
| 31982948 | 31982948 | PRJNA849172_P_NODE_139418_length_208_cov_5.570370_g139058_i0 | PRJNA849172 | 139418 | 208 | 5.57037 | 11.5863696 | Leptospira mgodei | 3235172 | Bacteria | Bacteria | 46.6 | 7.61e-4 | NR | XDD54609.1 | 3235172 | g139058 | i0 | 46.7 | 2.59615384615385 | 60 | 28 | 80.8 | 2 | 168 | 1 | 25 | 84 | XDD54609.1 hypothetical protein AB3N62_02025 [Leptospira mgodei] | diamond | 540 | 46.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira mgodei | ||
| 32236525 | 32236525 | PRJNA849172_P_NODE_140218_length_207_cov_5.776119_g139858_i0 | PRJNA849172 | 140218 | 207 | 5.776119 | 11.95656633 | Treponema | 157 | Bacteria | Bacteria | 45.4 | 0.00129 | NR | WP_002674090.1 | 157 | g139858 | i0 | 91.7 | 0.347826086956522 | 24 | 2 | 34.8 | 0 | 205 | 134 | 132 | 155 | WP_002674090.1 MULTISPECIES: pyridoxamine 5'-phosphate oxidase family protein [Treponema] | diamond | 72 | 45.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | |||
| 32426111 | 32426111 | PRJNA849172_P_NODE_69879_length_270_cov_1.279188_g69519_i0 | PRJNA849172 | 69879 | 270 | 1.279188 | 3.4538076 | Treponema sp. OMZ 3 | 166 | Bacteria | Bacteria | 152 | 7.28e-41 | NR | WP_253675511.1 | 1659192 | g69519 | i0 | 79.5 | 1.96666666666667 | 88 | 18 | 97.8 | 0 | 266 | 3 | 248 | 335 | WP_253675511.1 hypothetical protein [Treponema sp. OMZ 305] | diamond | 531 | 152 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 305 | ||
| 32646683 | 32646683 | PRJNA849172_P_NODE_104920_length_244_cov_0.877193_g104560_i0 | PRJNA849172 | 104920 | 244 | 0.877193 | 2.14035092 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 43.1 | 0.0265 | NR | GIX42512.1 | 2026757 | g104560 | i0 | 33.9 | 2.15163934426229 | 59 | 38 | 72.5 | 1 | 179 | 3 | 13 | 70 | GIX42512.1 MAG: serine protease [Leptospiraceae bacterium] | diamond | 525 | 43.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 32718431 | 32718431 | PRJNA849172_P_NODE_127280_length_226_cov_4.339869_g126920_i0 | PRJNA849172 | 127280 | 226 | 4.339869 | 9.80810394 | Spirochaetales | 136 | Bacteria | Bacteria | 65.9 | 2.17e-11 | NR | MCR5494629.1 | 166 | g126920 | i0 | 46.4 | 4.11504424778761 | 69 | 34 | 87.6 | 2 | 2 | 199 | 12 | 80 | MCR5494629.1 DUF192 domain-containing protein [Treponema sp.] | diamond | 930 | 65.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 32898799 | 32898799 | PRJNA849172_P_NODE_107280_length_242_cov_4.360947_g106920_i0 | PRJNA849172 | 107280 | 242 | 4.360947 | 10.55349174 | Treponema maltophilum | 51160 | Bacteria | Bacteria | 70.9 | 1.99e-12 | NR | WP_016526283.1 | 51160 | g106920 | i0 | 74.5 | 0.582644628099174 | 47 | 11 | 57 | 1 | 1 | 138 | 222 | 268 | WP_016526283.1 transglycosylase SLT domain-containing protein [Treponema maltophilum] | diamond | 141 | 70.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema maltophilum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;