RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA849172", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA849172 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9763535 9763535 PRJNA849172_P_NODE_15348_length_533_cov_15.654348_g14989_i0 PRJNA849172 15348 533 15.654348 83.43767484 Metazoa 33208 Hemichordata other_Eukaryota 217 8.33e-65   NR XP_070543216.1 63121 g14989 i0 67.1 11.4427767354597 152 50 85.6 0 6 461 343 494 XP_070543216.1 catalase-like [Ptychodera flava] diamond 6099 217 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
26611453 26611453 PRJNA849172_P_NODE_124681_length_228_cov_3.148387_g124321_i0 PRJNA849172 124681 228 3.148387 7.17832236 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 49.7 1.09e-4   NR XP_006819732.1 10224 g124321 i0 60 0.921052631578947 35 14 46.1 0 199 95 845 879 XP_006819732.1 PREDICTED: SID1 transmembrane family member 1-like [Saccoglossus kowalevskii] diamond 210 49.7 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
31896405 31896405 PRJNA849172_P_NODE_65337_length_274_cov_10.975124_g64977_i0 PRJNA849172 65337 274 10.975124 30.07183976 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 142 1.31e-37   NR XP_002736636.1 10224 g64977 i0 78.9 25.5656934306569 90 19 98.5 0 271 2 429 518 XP_002736636.1 PREDICTED: T-complex protein 1 subunit delta-like [Saccoglossus kowalevskii] diamond 7005 142 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;