RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA849172", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 6 ✖

tax_kingdom 1

  • Metazoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA849172 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2109723 2109723 PRJNA849172_P_NODE_106942_length_242_cov_20.088757_g106582_i0 PRJNA849172 106942 242 20.088757 48.61479194 Claudrilus corderoi 3262671 Annelida Annelida 91.6 4.62e-14   NTclustered gi|923872644|gb|KJ451231.1| 3262671 g106582 i0 91.045 3.2603305785124 67 6 28 0 9 75 261 195 Claudrilus corderoi 28S ribosomal RNA gene, partial sequence blastn 789 91.6 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Protodrilidae Claudrilus Claudrilus corderoi
3783853 3783853 PRJNA849172_P_NODE_12043_length_610_cov_17.685289_g11688_i0 PRJNA849172 12043 610 17.685289 107.8802629 Placobdella 6414 Annelida Annelida 84.2 2.14e-11   NTclustered gi|1028609206|emb|LT159850.1| 60933 g11688 i0 100 1.2327868852459 45 0 7 0 554 598 4821 4865 Placobdella parasitica strain ONAP mitochondrion, partial genome blastn 752 84.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Placobdella Placobdella parasitica
15260934 15260934 PRJNA849172_P_NODE_79032_length_260_cov_5.860963_g78672_i0 PRJNA849172 79032 260 5.860963 15.2385038 root 1 Root_unresolved Root_unresolved 90.5 5.45e-19   NR ELU17401.1 283909 g78672 i0 86 26.1923076923077 50 7 57.7 0 259 110 396 445 ELU17401.1 hypothetical protein CAPTEDRAFT_127356 [Capitella teleta] diamond 6810 90.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
27655294 27655294 PRJNA849172_P_NODE_30144_length_373_cov_28.840000_g29785_i0 PRJNA849172 30144 373 28.84 107.5732 Dimorphilus gyrociliatus 2664684 Annelida Annelida 57.4 1.14e-6   NR CAD5119222.1 2664684 g29785 i0 45.5 1.68096514745308 55 29 43.4 1 3 164 472 526 CAD5119222.1 DgyrCDS7854 [Dimorphilus gyrociliatus] diamond 627 57.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Dinophilidae Dimorphilus Dimorphilus gyrociliatus
29328399 29328399 PRJNA849172_P_NODE_11049_length_641_cov_20.588028_g10697_i0 PRJNA849172 11049 641 20.588028 131.96925948 Owenia fusiformis 6347 Annelida Annelida 91.3 1.03e-18   NR CAH1799946.1 6347 g10697 i0 39.7 6.21528861154446 194 110 87.5 2 588 28 4 197 CAH1799946.1 unnamed protein product [Owenia fusiformis] diamond 3984 91.3 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
30979614 30979614 PRJNA849172_P_NODE_136914_length_211_cov_6.260870_g136554_i0 PRJNA849172 136914 211 6.26087 13.2104357 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 47.8 4.01e-4   NR KAK2165860.1 27915 g136554 i0 36.5 2.55924170616114 63 38 86.7 1 206 24 279 341 KAK2165860.1 hypothetical protein NP493_1347g00016 [Ridgeia piscesae] diamond 540 47.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;