RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA849172", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA849172 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11436205 11436205 PRJNA849172_P_NODE_3209_length_1238_cov_84.121888_g2992_i0 PRJNA849172 3209 1238 84.121888 1041.42897344 Fungi 4751 Fungi Fungi 183 4.3e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g2992 i0 95.652 12.9337641357027 115 4 9 1 1011 1125 5537 5650 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16012 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
29905384 29905384 PRJNA849172_P_NODE_76851_length_262_cov_10.624339_g76491_i0 PRJNA849172 76851 262 10.624339 27.83576818 Nosematidae 27974 Fungi Fungi 42.7 0.029   NR KAG0440815.1 279532 g76491 i0 60 0.881679389312977 25 10 28.6 0 10 84 145 169 KAG0440815.1 60S ribosomal protein L11 [Dictyocoela muelleri] diamond 231 42.7 1 Eukaryota Opisthokonta Fungi Microsporidia       Dictyocoela Dictyocoela muelleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;