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contig_metadata

14 rows where bioproject = "PRJNA849172", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 14 ✖

tax_clade 1

  • Sar · 14 ✖

bioproject 1

  • PRJNA849172 · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3783644 3783644 PRJNA849172_P_NODE_100903_length_246_cov_0.895954_g100543_i0 PRJNA849172 100903 246 0.895954 2.20404684 root 1 Root_unresolved Root_unresolved 427 3.16e-115   NTclustered gi|166046486|emb|CU367603.1| 100861 g100543 i0 97.976 40.8739837398374 247 4 100 1 1 246 309 63 Aphanomyces euteiches cDNA blastn 10055 427 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
6337124 6337124 PRJNA849172_P_NODE_95305_length_248_cov_13.360000_g94945_i0 PRJNA849172 95305 248 13.36 33.1328 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 78.2 1.46e-15   NR KAF0700968.1 120398 g94945 i0 60.6 2.39516129032258 66 26 79.8 0 4 201 142 207 KAF0700968.1 hypothetical protein As57867_008506 [Aphanomyces stellatus] diamond 594 78.2 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
8489076 8489076 PRJNA849172_P_NODE_40567_length_324_cov_43.641434_g40207_i0 PRJNA849172 40567 324 43.641434 141.39824616 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 121 8.229999999999999e-23   NTclustered gi|669137463|ref|XM_008606078.1| 1156394 g40207 i0 81.818 15.0802469135802 143 26 44 0 182 324 2027 1885 Saprolegnia diclina VS20 heat shock protein 90-2 partial mRNA blastn 4886 121 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
13591682 13591682 PRJNA849172_P_NODE_9871_length_684_cov_50.407529_g9522_i0 PRJNA849172 9871 684 50.407529 344.78749836 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 263 2.9000000000000002e-65   NTclustered gi|937408816|ref|NC_027966.1| 114742 g9522 i0 76.265 1.53801169590643 573 90 81 37 125 677 32433 31887 Pythium insidiosum mitochondrial DNA, complete genome blastn 1052 263 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
25459316 25459316 PRJNA849172_P_NODE_50700_length_294_cov_5.171946_g50340_i0 PRJNA849172 50700 294 5.171946 15.20552124 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 178 4.31e-40   NTclustered gi|58202010|gb|AY898628.1| 4787 g50340 i0 88.966 50.6836734693878 145 15 49 1 3 147 2324 2467 Phytophthora infestans haplotype IIb mitochondrion, complete genome blastn 14901 178 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
26737842 26737842 PRJNA849172_P_NODE_120961_length_231_cov_3.018987_g120601_i0 PRJNA849172 120961 231 3.018987 6.97385997 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 138 9.52e-40   NR KAL0581093.1 65357 g120601 i0 94.8 2 77 4 100 0 1 231 7 83 KAL0581093.1 hypothetical protein ABG067_008481, partial [Albugo candida] diamond 462 138 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
28073802 28073802 PRJNA849172_P_NODE_31725_length_364_cov_3.773196_g31366_i0 PRJNA849172 31725 364 3.773196 13.73443344 root 1 Root_unresolved Root_unresolved 238 9.38e-78   NR KAL0582261.1 65357 g31366 i0 99.2 2.99175824175824 121 1 99.7 0 2 364 40 160 KAL0582261.1 hypothetical protein ABG067_007890, partial [Albugo candida] diamond 1089 238 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
28318101 28318101 PRJNA849172_P_NODE_13406_length_575_cov_24.121514_g13048_i0 PRJNA849172 13406 575 24.121514 138.6987055 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 131 1.99e-31   NR KAJ0396306.1 114742 g13048 i0 60.2 2.17565217391304 108 43 56.3 0 173 496 1675 1782 KAJ0396306.1 hypothetical protein P43SY_007156 [Pythium insidiosum] diamond 1251 131 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
28444591 28444591 PRJNA849172_P_NODE_33146_length_356_cov_22.212014_g32787_i0 PRJNA849172 33146 356 22.212014 79.07476984 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 107 2.86e-24   NR KAF1336584.1 82926 g32787 i0 64 0.72471910112359506 86 23 65.7 1 6 239 628 713 KAF1336584.1 Transmembrane protein, partial [Globisporangium splendens] diamond 258 107 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
28697233 28697233 PRJNA849172_P_NODE_60267_length_280_cov_21.995169_g59907_i0 PRJNA849172 60267 280 21.995169 61.5864732 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 46.6 0.00106   NR DBA00579.1 4803 g59907 i0 47.1 0.75 70 32 75 2 278 69 84 148 DBA00579.1 TPA: hypothetical protein N0F65_007708 [Lagenidium giganteum] diamond 210 46.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
29557712 29557712 PRJNA849172_P_NODE_133030_length_216_cov_17.489510_g132670_i0 PRJNA849172 133030 216 17.48951 37.7773416 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 98.2 7.48e-25   NR KAH9091754.1 100861 g132670 i0 72.7 1.52777777777778 55 15 76.4 0 5 169 32 86 KAH9091754.1 hypothetical protein Ae201684P_011298 [Aphanomyces euteiches] diamond 330 99 0.991919191919192 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
30379515 30379515 PRJNA849172_P_NODE_80052_length_259_cov_9.946237_g79692_i0 PRJNA849172 80052 259 9.946237 25.76075383 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.00409   NR OQR81488.1 74557 g79692 i0 48.7 2.07335907335907 39 20 45.2 0 65 181 78 116 OQR81488.1 hypothetical protein THRCLA_23360, partial [Thraustotheca clavata] diamond 537 44.7 0.991051454138702 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
31603581 31603581 PRJNA849172_P_NODE_98496_length_247_cov_1.436782_g98136_i0 PRJNA849172 98496 247 1.436782 3.54885154 Peronospora farinosa 134698 SAR_Eukaryotes SAR_Eukaryotes 127 1.23e-32   NR CAH0488358.1 134698 g98136 i0 80.7 5.04048582995951 83 13 99.6 2 1 246 65 145 CAH0488358.1 unnamed protein product [Peronospora farinosa] diamond 1245 127 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora farinosa
32709971 32709971 PRJNA849172_P_NODE_120880_length_231_cov_3.436709_g120520_i0 PRJNA849172 120880 231 3.436709 7.93879779 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 79 5.5e-15   NR KAH9131724.1 100861 g120520 i0 50.6 3 77 37 98.7 1 2 229 292 368 KAH9131724.1 hypothetical protein LEN26_007646 [Aphanomyces euteiches] diamond 693 79 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;