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contig_metadata

16 rows where bioproject = "PRJNA849172", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 16 ✖

tax_clade 1

  • Sar · 16 ✖

bioproject 1

  • PRJNA849172 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3385220 3385220 PRJNA849172_P_NODE_115483_length_235_cov_19.376543_g115123_i0 PRJNA849172 115483 235 19.376543 45.53487605 Plasmodium reichenowi 5854 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|1145256240|ref|XM_012905638.2| 5854 g115123 i0 100 0.123404255319149 29 0 12 0 66 94 1430 1458 Plasmodium reichenowi exported protein (hyp1) partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
3386388 3386388 PRJNA849172_P_NODE_21043_length_450_cov_1.851459_g20684_i0 PRJNA849172 21043 450 1.851459 8.3315655 Gregarina sp. Phaedon/Daegwallyeong/2010 1049247 SAR_Eukaryotes SAR_Eukaryotes 172 3.21e-38   NTclustered gi|339715944|gb|JF412715.1| 1049247 g20684 i0 79.197 13.4266666666667 274 37 59 17 1 264 3078 3341 Gregarina sp. Phaedon/Daegwallyeong/2010 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence; and 28S-18S intergenic spacer, partial sequence blastn 6042 172 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina sp. Phaedon/Daegwallyeong/2010
7611052 7611052 PRJNA849172_P_NODE_8146_length_762_cov_35.352685_g7809_i0 PRJNA849172 8146 762 35.352685 269.3874597 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 531 8.05e-146   NTclustered gi|833494855|ref|XM_012915027.1| 5866 g7809 i0 92.513 432.494750656168 374 22 49 4 2 374 396 28 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 329561 531 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
10160459 10160459 PRJNA849172_P_NODE_117848_length_233_cov_18.368750_g117488_i0 PRJNA849172 117848 233 18.36875 42.7991875 Babesia 5864 SAR_Eukaryotes SAR_Eukaryotes 248 2.48e-61   NTclustered gi|1717244046|gb|MN252431.1| 35084 g117488 i0 91.257 78.5793991416309 183 14 78 2 4 185 1135 954 Babesia sp. isolate TC-B-90 small subunit ribosomal RNA gene, partial sequence blastn 18309 248 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp.
11037766 11037766 PRJNA849172_P_NODE_10009_length_679_cov_27.196370_g9659_i0 PRJNA849172 10009 679 27.19637 184.6633523 Cystoisospora felis 482539 SAR_Eukaryotes SAR_Eukaryotes 167 2.32e-36   NTclustered gi|3323386|gb|U85705.1|IFU85705 482539 g9659 i0 92.982 16.7864506627393 114 8 17 0 181 294 2037 1924 Isospora felis 28S large subunit ribosomal RNA gene, complete sequence blastn 11398 167 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora felis
12315386 12315386 PRJNA849172_P_NODE_39850_length_327_cov_4.452756_g39490_i0 PRJNA849172 39850 327 4.452756 14.56051212 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|915133579|ref|XM_013480517.1| 5804 g39490 i0 100 0.55045871559633 30 0 9 0 235 264 214 243 Eimeria maxima XPA-binding protein, putative partial mRNA blastn 180 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
12316242 12316242 PRJNA849172_P_NODE_68530_length_271_cov_2.515152_g68170_i0 PRJNA849172 68530 271 2.515152 6.81606192 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 473 4.4799999999999996e-129   NTclustered gi|820695469|tpe|LN714488.1| 572307 g68170 i0 98.155 4.99261992619926 271 5 100 0 1 271 117208 117478 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 1353 473 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
13589197 13589197 PRJNA849172_P_NODE_15351_length_533_cov_14.060870_g14992_i0 PRJNA849172 15351 533 14.06087 74.9444371 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 179 7.959999999999999e-54   NR XP_011129527.1 110365 g14992 i0 63.4 0.861163227016886 153 54 85 1 532 80 18 170 XP_011129527.1 ribosomal protein L19 [Gregarina niphandrodes] diamond 459 179 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
14865023 14865023 PRJNA849172_P_NODE_6752_length_844_cov_3.162127_g6436_i0 PRJNA849172 6752 844 3.162127 26.68835188 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 519 2.75e-184   NR XP_011134762.1 110365 g6436 i0 88.3 0.998815165876777 281 33 99.9 0 1 843 30 310 XP_011134762.1 pyruvate kinase [Gregarina niphandrodes] diamond 843 519 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
17414986 17414986 PRJNA849172_P_NODE_56974_length_285_cov_1.683962_g56614_i0 PRJNA849172 56974 285 1.683962 4.7992917 Gregarina sp. Phaedon/Daegwallyeong/2010 1049247 SAR_Eukaryotes SAR_Eukaryotes 141 5.46e-29   NTclustered gi|339715944|gb|JF412715.1| 1049247 g56614 i0 88.235 43.3438596491228 119 12 62 2 54 171 3617 3734 Gregarina sp. Phaedon/Daegwallyeong/2010 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence; and 28S-18S intergenic spacer, partial sequence blastn 12353 141 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina sp. Phaedon/Daegwallyeong/2010
20358892 20358892 PRJNA849172_P_NODE_35236_length_346_cov_6.465201_g34877_i0 PRJNA849172 35236 346 6.465201 22.36959546 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 65.8 4.21e-6   NTclustered gi|1425132576|gb|MH618774.1| 27992 g34877 i0 100 10.014450867052 35 0 10 0 1 35 62 28 Theileria sp. isolate P11 small subunit ribosomal RNA gene, partial sequence blastn 3465 65.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria sp.
28286345 28286345 PRJNA849172_P_NODE_3506_length_1188_cov_3.420628_g3279_i0 PRJNA849172 3506 1188 3.420628 40.63706064 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 80.5 1.19e-12   NR XP_011128453.1 110365 g3279 i0 24.3 1.13383838383838 370 123 65.9 13 1181 399 10 331 XP_011128453.1 hypothetical protein GNI_000970 [Gregarina niphandrodes] diamond 1347 80.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
30054711 30054711 PRJNA849172_P_NODE_9371_length_706_cov_4.252765_g9024_i0 PRJNA849172 9371 706 4.252765 30.0245209 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 372 3.3799999999999997e-128   NR XP_011131176.1 110365 g9024 i0 78.1 0.990084985835694 233 51 99 0 1 699 25 257 XP_011131176.1 putative 60S ribosomal protein L7 [Gregarina niphandrodes] diamond 699 372 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
30402837 30402837 PRJNA849172_P_NODE_16233_length_517_cov_3.004505_g15874_i0 PRJNA849172 16233 517 3.004505 15.53329085 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 202 4.38e-59   NR XP_011130055.1 110365 g15874 i0 66.3 0.998065764023211 172 57 99.8 1 517 2 317 487 XP_011130055.1 pyruvate kinase [Gregarina niphandrodes] diamond 516 202 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
30686581 30686581 PRJNA849172_P_NODE_132413_length_217_cov_8.250000_g132053_i0 PRJNA849172 132413 217 8.25 17.9025 Babesia microti strain RI 1133968 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.00219   NR XP_012648586.1 1133968 g132053 i0 44.4 2.26728110599078 54 29 74.7 1 4 165 276 328 XP_012648586.1 Kelch motif [Babesia microti strain RI] diamond 492 45.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti
30695033 30695033 PRJNA849172_P_NODE_29173_length_379_cov_10.986928_g28814_i0 PRJNA849172 29173 379 10.986928 41.64045712 root 1 Root_unresolved Root_unresolved 82 3.44e-17   NR XP_011130617.1 110365 g28814 i0 41.2 3.17414248021108 114 67 90.2 0 13 354 8 121 XP_011130617.1 putative 60S ribosomal protein L26 [Gregarina niphandrodes] diamond 1203 82 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;