RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA849172" and tax_clade = "Pithoviruses"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Pithoviruses · 2 ✖

bioproject 1

  • PRJNA849172 · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25061132 25061132 PRJNA849172_P_NODE_130380_length_220_cov_30.047619_g130020_i0 PRJNA849172 130380 220 30.047619 66.1047618 Pithovirus LCPAC001 2506585 Viruses Viruses 54.7 0.005   NTclustered gi|1588063028|gb|MK500429.1| 2506585 g130020 i0 100 0.131818181818182 29 0 13 0 44 72 2356 2328 MAG: Pithovirus LCPAC001 genomic sequence blastn 29 54.7 1 Viruses Pithoviruses             Pithovirus LCPAC001
29202328 29202328 PRJNA849172_P_NODE_129009_length_223_cov_4.566667_g128649_i0 PRJNA849172 129009 223 4.566667 10.18366741 Pithovirus LCPAC4 2506596 Viruses Viruses 42.7 0.0275   NR QBK92944.1 2506596 g128649 i0 48.7 0.524663677130045 39 20 52.5 0 6 122 293 331 QBK92944.1 MAG: DNA primase [Pithovirus LCPAC403] diamond 117 42.7 1 Viruses Pithoviruses             Pithovirus LCPAC403

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;