RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA849172", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

bioproject 1

  • PRJNA849172 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2508169 2508169 PRJNA849172_P_NODE_49502_length_297_cov_15.973214_g49142_i0 PRJNA849172 49502 297 15.973214 47.44044558 Bacteria 2 Bacteria Bacteria 159 1.58e-34   NTclustered gi|1938788434|gb|CP054181.1| 2053306 g49142 i0 77.899 78.1515151515152 276 47 91 11 28 297 1602088 1602355 Ignavibacteria bacterium isolate H1_BAC2 chromosome blastn 23211 159 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
21239119 21239119 PRJNA849172_P_NODE_67177_length_272_cov_16.839196_g66817_i0 PRJNA849172 67177 272 16.839196 45.80261312 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 54.7 0.007   NTclustered gi|2621704225|emb|OY761615.1| 2651163 g66817 i0 100 0.106617647058824 29 0 11 0 128 156 4196783 4196811 MAG: Ignavibacteriaceae bacterium isolate 0c874fb2-9291-49ee-bde1-826c4484edf3 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
28318152 28318152 PRJNA849172_P_NODE_69966_length_269_cov_9.877551_g69606_i0 PRJNA849172 69966 269 9.877551 26.57061219 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 56.6 6.57e-7   NR MCB0714072.1 2026749 g69606 i0 30.7 0.981412639405205 88 58 98.1 1 5 268 34 118 MCB0714072.1 hypothetical protein [Ignavibacteriota bacterium] diamond 264 56.6 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
28854691 28854691 PRJNA849172_P_NODE_106128_length_243_cov_1.823529_g105768_i0 PRJNA849172 106128 243 1.823529 4.43117547 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 52 1.06e-6   NR MCB0711777.1 2026749 g105768 i0 68.6 0.432098765432099 35 11 43.2 0 139 243 1 35 MCB0711777.1 heavy-metal-associated domain-containing protein [Ignavibacteriota bacterium] diamond 105 52 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
29928646 29928646 PRJNA849172_P_NODE_31131_length_367_cov_9.622449_g30772_i0 PRJNA849172 31131 367 9.622449 35.31438783 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 222 1.07e-68   NR MFO7448437.1 2651163 g30772 i0 88.5 0.997275204359673 122 14 99.7 0 367 2 214 335 MFO7448437.1 efflux RND transporter periplasmic adaptor subunit [Ignavibacteriaceae bacterium] diamond 366 222 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
32781202 32781202 PRJNA849172_P_NODE_118120_length_233_cov_4.831250_g117760_i0 PRJNA849172 118120 233 4.83125 11.2568125 Pseudomonadati 3379134 Bacteria Bacteria 135 7.98e-36   NR KXK05317.1 1617411 g117760 i0 89.6 10.9055793991416 77 8 99.1 0 231 1 147 223 KXK05317.1 MAG: hypothetical protein UZ04_CHB001000724 [Chlorobi bacterium OLB4] diamond 2541 135 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Candidatus Tepidiaquacellales     Candidatus Tepidiaquacellales bacterium OLB4/UTCHB1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;