RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA849172", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA849172 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17416248 17416248 PRJNA849172_P_NODE_99994_length_246_cov_2.196532_g99634_i0 PRJNA849172 99994 246 2.196532 5.40346872 uncultured Latescibacterota bacterium 199737 Bacteria Bacteria 91.6 4.71e-14   NTclustered gi|2531976039|emb|OY282377.1| 199737 g99634 i0 89.041 31.0487804878049 73 8 30 0 14 86 5654035 5653963 MAG: uncultured Latescibacteria bacterium genome assembly, chromosome: 1 blastn 7638 91.6 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium
22513439 22513439 PRJNA849172_P_NODE_53678_length_289_cov_4.324074_g53318_i0 PRJNA849172 53678 289 4.324074 12.49657386 uncultured Latescibacterota bacterium 199737 Bacteria Bacteria 71.3 7.38e-8   NTclustered gi|2531976020|emb|OY282352.1| 199737 g53318 i0 95.556 176.086505190311 45 1 16 1 218 262 1612851 1612894 MAG: uncultured Latescibacteria bacterium genome assembly, chromosome: 1 blastn 50889 71.3 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;