RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA849172", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA849172 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28128846 28128846 PRJNA849172_P_NODE_58685_length_282_cov_13.248804_g58325_i0 PRJNA849172 58685 282 13.248804 37.36162728 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 88.6 4.79e-18   NR MCC6143677.1 2030809 g58325 i0 45.7 1 94 51 100 0 1 282 753 846 MCC6143677.1 AAA family ATPase [Candidatus Hydrogenedentota bacterium] diamond 282 88.6 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31066125 31066125 PRJNA849172_P_NODE_140635_length_207_cov_4.358209_g140275_i0 PRJNA849172 140635 207 4.3582090000000004 9.02149263 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 97.4 8.7e-23   NR MBP9003129.1 2030809 g140275 i0 67.6 6.89855072463768 68 22 98.6 0 3 206 40 107 MBP9003129.1 FAD-dependent thymidylate synthase [Candidatus Hydrogenedentota bacterium] diamond 1428 97.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;