RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where bioproject = "PRJNA849172", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 12 ✖

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA849172 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5938814 5938814 PRJNA849172_P_NODE_20465_length_456_cov_14.404700_g20106_i0 PRJNA849172 20465 456 14.4047 65.685432 Acrasis kona 1008807 Heterolobosea other_Eukaryota 214 5.22e-68   NR KAL0480982.1 1008807 g20106 i0 67.1 0.980263157894737 149 49 98 0 1 447 46 194 KAL0480982.1 Ras-related protein Rac [Acrasis kona] diamond 447 214 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
7213337 7213337 PRJNA849172_P_NODE_140126_length_207_cov_6.477612_g139766_i0 PRJNA849172 140126 207 6.477612 13.40865684 Tetramitus jugosus 166959 Heterolobosea other_Eukaryota 370 4.4e-98   NTclustered gi|2233316042|emb|OW569396.1| 166959 g139766 i0 100 0.966183574879227 200 0 97 0 8 207 40591 40392 Tetramitus jugosus genome assembly, organelle: mitochondrion blastn 200 370 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Tetramitus Tetramitus jugosus
9764522 9764522 PRJNA849172_P_NODE_46408_length_306_cov_15.918455_g46048_i0 PRJNA849172 46408 306 15.918455 48.7104723 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 103 1.3399999999999999e-24   NR YP_007890028.1 5763 g46048 i0 51 0.980392156862745 100 46 98 1 3 302 74 170 YP_007890028.1 succinate:cytochrome c oxidoreductase subunit 2 [Naegleria fowleri] diamond 300 103 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
13591520 13591520 PRJNA849172_P_NODE_93251_length_250_cov_0.881356_g92891_i0 PRJNA849172 93251 250 0.881356 2.20339 root 1 Root_unresolved Root_unresolved 89.4 1.89e-19   NR KAL0488991.1 1008807 g92891 i0 59.4 11.496 64 26 76.8 0 43 234 188 251 KAL0488991.1 ribosomal protein L2 [Acrasis kona] diamond 2874 89.7 0.996655518394649 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
18686103 18686103 PRJNA849172_P_NODE_127475_length_225_cov_7.513158_g127115_i0 PRJNA849172 127475 225 7.513158 16.9046055 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 52.8 0.02   NTclustered gi|2119416215|ref|XM_044699845.1| 51637 g127115 i0 94.118 0.151111111111111 34 2 15 0 15 48 194 227 Naegleria lovaniensis uncharacterized protein (C9374_009636), partial mRNA blastn 34 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
26611474 26611474 PRJNA849172_P_NODE_18941_length_475_cov_17.119403_g18582_i0 PRJNA849172 18941 475 17.119403 81.31716425 Acrasis kona 1008807 Heterolobosea other_Eukaryota 164 2.52e-47   NR KAL0477182.1 1008807 g18582 i0 65.7 0.682105263157895 108 37 68.2 0 447 124 166 273 KAL0477182.1 MBL fold metallo-hydrolase [Acrasis kona] diamond 324 164 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27663581 27663581 PRJNA849172_P_NODE_36324_length_341_cov_10.250000_g35965_i0 PRJNA849172 36324 341 10.25 34.9525 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 67.4 4.44e-11   NR CAG4711175.1 5763 g35965 i0 59.3 5.92961876832845 54 21 47.5 1 330 169 134 186 CAG4711175.1 unnamed protein product [Naegleria fowleri] diamond 2022 67.8 0.994100294985251 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
30244533 30244533 PRJNA849172_P_NODE_18352_length_483_cov_11.068293_g17993_i0 PRJNA849172 18352 483 11.068293 53.45985519 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 115 5.96e-29   NR XP_044552668.1 51637 g17993 i0 39.9 0.981366459627329 158 89 98.1 3 478 5 40 191 XP_044552668.1 uncharacterized protein C9374_000115 [Naegleria lovaniensis] diamond 474 115 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
30560105 30560105 PRJNA849172_P_NODE_13813_length_566_cov_2.563895_g13455_i0 PRJNA849172 13813 566 2.563895 14.5116457 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 59.7 4.33e-7   NR XP_044543127.1 51637 g13455 i0 22.8 1.32508833922261 123 93 64.1 1 533 171 106 228 XP_044543127.1 uncharacterized protein C9374_011618 [Naegleria lovaniensis] diamond 750 59.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
31002807 31002807 PRJNA849172_P_NODE_6574_length_855_cov_52.589514_g6259_i0 PRJNA849172 6574 855 52.589514 449.6403447 Acrasis kona 1008807 Heterolobosea other_Eukaryota 169 3.99e-45   NR KAL0489666.1 1008807 g6259 i0 36 1.04210526315789 297 157 98.9 8 854 9 212 490 KAL0489666.1 cytochrome P450 [Acrasis kona] diamond 891 169 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31793013 31793013 PRJNA849172_P_NODE_80657_length_259_cov_2.387097_g80297_i0 PRJNA849172 80657 259 2.387097 6.18258123 Acrasis kona 1008807 Heterolobosea other_Eukaryota 100 1.23e-24   NR KAL0487640.1 1008807 g80297 i0 63 0.938223938223938 81 30 93.8 0 2 244 82 162 KAL0487640.1 ribosomal protein L21 [Acrasis kona] diamond 243 100 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32109643 32109643 PRJNA849172_P_NODE_87858_length_253_cov_1.688889_g87498_i0 PRJNA849172 87858 253 1.688889 4.27288917 Acrasis kona 1008807 Heterolobosea other_Eukaryota 100 4.4299999999999996e-24   NR KAL0479000.1 1008807 g87498 i0 51.8 0.984189723320158 83 40 98.4 0 1 249 59 141 KAL0479000.1 hypothetical protein AKO1_007878 [Acrasis kona] diamond 249 100 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;