RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA849172", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA849172 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9764329 9764329 PRJNA849172_P_NODE_40408_length_325_cov_4.376984_g40048_i0 PRJNA849172 40408 325 4.376984 14.225198 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 76.8 1.81e-9   NTclustered gi|2814788387|emb|OY762897.2| 2838779 g40048 i0 88.889 1.74769230769231 63 5 19 2 247 308 2539346 2539407 MAG: Candidatus Binatia bacterium isolate 08c4157d-86a7-49cc-8b26-f3076a3ae996 genome assembly, chromosome: 1 blastn 568 76.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28412913 28412913 PRJNA849172_P_NODE_121646_length_230_cov_5.159236_g121286_i0 PRJNA849172 121646 230 5.159236 11.8662428 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 129 1.88e-33   NR MCX8071909.1 2838779 g121286 i0 77 0.965217391304348 74 17 96.5 0 225 4 52 125 MCX8071909.1 hypothetical protein [Candidatus Binatia bacterium] diamond 222 129 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31318654 31318654 PRJNA849172_P_NODE_102975_length_244_cov_10.964912_g102615_i0 PRJNA849172 102975 244 10.964912 26.75438528 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 55.8 9.34e-7   NR HTW87651.1 2785449 g102615 i0 40.7 1.7827868852459 81 48 99.6 0 2 244 572 652 HTW87651.1 rhamnan synthesis F family protein [Candidatus Binataceae bacterium] diamond 435 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
31445265 31445265 PRJNA849172_P_NODE_118996_length_232_cov_12.207547_g118636_i0 PRJNA849172 118996 232 12.207547 28.32150904 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 92.4 8.079999999999999e-23   NR MCX8072778.1 2838779 g118636 i0 82.7 0.672413793103448 52 9 67.2 0 221 66 10 61 MCX8072778.1 transposase [Candidatus Binatia bacterium] diamond 156 92.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;