RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA849172", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_clade 1

  • Apusozoa · 3 ✖

bioproject 1

  • PRJNA849172 · 3 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7215938 7215938 PRJNA849172_P_NODE_93266_length_250_cov_0.881356_g92906_i0 PRJNA849172 93266 250 0.881356 2.20339 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 115 7.97e-29   NR XP_013760592.1 461836 g92906 i0 72 0.984 82 23 98.4 0 246 1 133 214 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 246 115 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30971230 30971230 PRJNA849172_P_NODE_35594_length_344_cov_32.612546_g35235_i0 PRJNA849172 35594 344 32.612546 112.18715824 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 105 5.48e-27   NR XP_013753308.1 461836 g35235 i0 58.3 0.732558139534884 84 35 73.3 0 312 61 9 92 XP_013753308.1 cystatin-B thiol proteinase inhibitor [Thecamonas trahens ATCC 50062] diamond 252 105 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32646738 32646738 PRJNA849172_P_NODE_45020_length_310_cov_8.915612_g44660_i0 PRJNA849172 45020 310 8.915612 27.6383972 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 51.2 8.13e-5   NR XP_013754918.1 461836 g44660 i0 42.6 0.658064516129032 68 30 58.1 4 284 105 45 111 XP_013754918.1 uncharacterized protein AMSG_12240 [Thecamonas trahens ATCC 50062] diamond 204 51.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;