RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA846486" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA846486 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8486030 8486030 PRJNA846486_P_NODE_14067_length_333_cov_4.658451_g13971_i0 PRJNA846486 14067 333 4.658451 15.51264183 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 115 3.95e-21   NTclustered gi|2754691654|gb|PP872616.1| 3003959 g13971 i0 80.124 0.966966966966967 161 27 47 5 7 164 6420 6262 MAG: Picornavirales sp. isolate TC-PLV-60 MR233-17E/328 genomic sequence blastn 322 115 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
18684633 18684633 PRJNA846486_P_NODE_73075_length_171_cov_2.278689_g72979_i0 PRJNA846486 73075 171 2.278689 3.89655819 Canine astrovirus 1157338 Viruses Viruses 311 2.14e-80   NTclustered gi|1355917460|gb|MF973500.1| 1157338 g72979 i0 99.415 72.8830409356725 171 1 100 0 1 171 6422 6592 Canine astrovirus strain CHN/2017/44, complete genome blastn 12463 311 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae Mamastrovirus Canine astrovirus
29422952 29422952 PRJNA846486_P_NODE_42049_length_211_cov_1.925926_g41953_i0 PRJNA846486 42049 211 1.925926 4.06370386 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 50.1 6.62e-5   NR XCM68141.1 3003959 g41953 i0 64.9 0.5260663507109 37 13 52.6 0 207 97 1875 1911 XCM68141.1 MAG: polyprotein, partial [Picornavirales sp.] diamond 111 50.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
32521143 32521143 PRJNA846486_P_NODE_16559_length_310_cov_1.624521_g16463_i0 PRJNA846486 16559 310 1.624521 5.0360151 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 156 1.19e-41   NR UNY42121.1 3003959 g16463 i0 67.6 0.987096774193548 102 33 98.7 0 308 3 990 1091 UNY42121.1 MAG: polyprotein 1 [Picornavirales sp.] diamond 306 156 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;