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contig_metadata

13 rows where bioproject = "PRJNA846486" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA846486 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13586890 13586890 PRJNA846486_P_NODE_44171_length_207_cov_2.215190_g44075_i0 PRJNA846486 44171 207 2.21519 4.5854433 Hyaloperonospora arabidopsidis 272952 SAR_Eukaryotes SAR_Eukaryotes 100 6.38e-17   NTclustered gi|2248512796|ref|NC_063789.1| 272952 g44075 i0 79.73 46.1449275362319 148 22 70 6 1 145 1013 1155 Hyaloperonospora arabidopsidis isolate Noks1 mitochondrion, complete genome blastn 9552 100 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora arabidopsidis
14861250 14861250 PRJNA846486_P_NODE_7632_length_442_cov_2.941476_g7538_i0 PRJNA846486 7632 442 2.941476 13.00132392 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 222 3.08e-53   NTclustered gi|673019759|ref|XM_008865619.1| 157072 g7538 i0 79.027 17.8144796380091 329 65 74 4 99 425 482 156 Aphanomyces invadans 40S ribosomal protein S23 mRNA blastn 7874 222 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
23785593 23785593 PRJNA846486_P_NODE_65159_length_179_cov_1.430769_g65063_i0 PRJNA846486 65159 179 1.430769 2.56107651 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 318 1.35e-82   NTclustered gi|1111669722|ref|NC_032051.1| 112090 g65063 i0 98.876 134.899441340782 178 2 99 0 1 178 2063 2240 Aphanomyces astaci isolate AP03 mitochondrion, complete genome blastn 24147 318 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
26746280 26746280 PRJNA846486_P_NODE_19461_length_289_cov_2.166667_g19365_i0 PRJNA846486 19461 289 2.166667 6.26166763 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 80.1 4.81e-15   NR TMW55519.1 41045 g19365 i0 45.7 3.92387543252595 94 44 97.6 1 8 289 204 290 TMW55519.1 hypothetical protein Poli38472_010401 [Pythium oligandrum] diamond 1134 80.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
28697155 28697155 PRJNA846486_P_NODE_86707_length_165_cov_0.896552_g86611_i0 PRJNA846486 86707 165 0.896552 1.4793108 Phytophthora fragariae 53985 SAR_Eukaryotes SAR_Eukaryotes 42.4 0.0174   NR KAE8905549.1 53985 g86611 i0 48.6 1.25454545454545 37 19 67.3 0 136 26 110 146 KAE8905549.1 hypothetical protein PF003_g10350 [Phytophthora fragariae] diamond 207 42.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
29170703 29170703 PRJNA846486_P_NODE_93249_length_162_cov_0.920354_g93153_i0 PRJNA846486 93249 162 0.920354 1.49097348 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 56.2 2.1e-7   NR GLE06712.1 114742 g93153 i0 59.6 1.74074074074074 47 19 87 0 14 154 375 421 GLE06712.1 hypothetical protein PINS_up016195 [Pythium insidiosum] diamond 282 56.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
30348021 30348021 PRJNA846486_P_NODE_78592_length_168_cov_1.025210_g78496_i0 PRJNA846486 78592 168 1.02521 1.7223528 root 1 Root_unresolved Root_unresolved 88.2 6.41e-20   NR DBA03562.1 4803 g78496 i0 73.1 5.57142857142857 52 14 92.9 0 12 167 1 52 DBA03562.1 TPA: hypothetical protein N0F65_011463 [Lagenidium giganteum] diamond 936 89 0.991011235955056 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
31445235 31445235 PRJNA846486_P_NODE_8416_length_423_cov_3.681818_g8321_i0 PRJNA846486 8416 423 3.681818 15.57409014 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 118 1.45e-30   NR GLD98056.1 114742 g8321 i0 65.2 1.26241134751773 89 30 62.4 1 2 265 96 184 GLD98056.1 hypothetical protein PINS_up006753 [Pythium insidiosum] diamond 534 118 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
31611844 31611844 PRJNA846486_P_NODE_26936_length_252_cov_2.216749_g26840_i0 PRJNA846486 26936 252 2.216749 5.58620748 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 99 3.039999999999999e-23   NR KAF0700380.1 120398 g26840 i0 59 6.88095238095238 83 33 98.8 1 250 2 42 123 KAF0700380.1 hypothetical protein As57867_009049 [Aphanomyces stellatus] diamond 1734 100 0.99 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
31792905 31792905 PRJNA846486_P_NODE_65417_length_179_cov_1.200000_g65321_i0 PRJNA846486 65417 179 1.2 2.148 Phytophthora megakarya 4795 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.0024   NR OWZ04956.1 4795 g65321 i0 51.1 5.83240223463687 45 21 73.7 1 9 140 286 330 OWZ04956.1 hypothetical protein PHMEG_00023046 [Phytophthora megakarya] diamond 1044 45.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megakarya
31824618 31824618 PRJNA846486_P_NODE_89997_length_163_cov_1.438596_g89901_i0 PRJNA846486 89997 163 1.438596 2.34491148 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 94 3.039999999999999e-23   NR KUF91244.1 4792 g89901 i0 75.9 4.96932515337423 54 13 99.4 0 163 2 50 103 KUF91244.1 hypothetical protein AM588_10004817 [Phytophthora nicotianae] diamond 810 94 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
32584247 32584247 PRJNA846486_P_NODE_61419_length_183_cov_1.552239_g61323_i0 PRJNA846486 61419 183 1.552239 2.84059737 Peronosclerospora sorghi 230839 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00339   NR KAI9911742.1 230839 g61323 i0 60.5 1.26229508196721 38 15 62.3 0 181 68 54 91 KAI9911742.1 hypothetical protein PsorP6_008793 [Peronosclerospora sorghi] diamond 231 44.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronosclerospora Peronosclerospora sorghi
32875764 32875764 PRJNA846486_P_NODE_29460_length_243_cov_1.309278_g29364_i0 PRJNA846486 29460 243 1.309278 3.18154554 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 54.7 2.3e-6   NR OQS05018.1 74557 g29364 i0 47.4 5.37037037037037 78 35 95.1 2 2 232 1229 1301 OQS05018.1 hypothetical protein THRCLA_02800, partial [Thraustotheca clavata] diamond 1305 55.1 0.992740471869329 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;