RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where bioproject = "PRJNA846486" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA846486 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2108814 2108814 PRJNA846486_P_NODE_90222_length_163_cov_1.350877_g90126_i0 PRJNA846486 90222 163 1.350877 2.20192951 Rhizopus homothallicus 86632 Fungi Fungi 62.1 2.26e-5   NTclustered gi|1240502106|gb|KX980502.1| 86632 g90126 i0 88.235 0.312883435582822 51 6 31 0 113 163 51 1 Rhizopus homothallicus strain HP487 28S ribosomal RNA gene, partial sequence blastn 51 62.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus homothallicus
17411452 17411452 PRJNA846486_P_NODE_49114_length_199_cov_1.853333_g49018_i0 PRJNA846486 49114 199 1.853333 3.68813267 root 1 Root_unresolved Root_unresolved 86.7 2.08e-19   NR KAG0324713.1 64523 g49018 i0 65.2 4.76381909547739 66 15 88.9 2 23 199 6 70 KAG0324713.1 peptidylprolyl isomerase protein [Podila humilis] diamond 948 86.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Podila Podila humilis
19082953 19082953 PRJNA846486_P_NODE_32335_length_234_cov_1.562162_g32239_i0 PRJNA846486 32335 234 1.562162 3.65545908 Mucorales 4827 Fungi Fungi 89.8 1.6e-13   NTclustered gi|2432197644|ref|XM_053125881.1| 64656 g32239 i0 93.333 5.05128205128205 60 4 26 0 1 60 928 987 Zychaea mexicana 60S ribosomal protein L3 (BDB00DRAFT_858678), mRNA blastn 1182 89.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Zychaea Zychaea mexicana
28002521 28002521 PRJNA846486_P_NODE_89425_length_164_cov_0.860870_g89329_i0 PRJNA846486 89425 164 0.86087 1.4118268 Phycomyces blakesleeanus NRRL 1555(-) 763407 Fungi Fungi 48.1 1.61e-4   NR XP_018299534.1 763407 g89329 i0 46.8 0.859756097560976 47 25 86 0 159 19 2045 2091 XP_018299534.1 hypothetical protein PHYBLDRAFT_129715 [Phycomyces blakesleeanus NRRL 1555(-)] diamond 141 48.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
29202282 29202282 PRJNA846486_P_NODE_35429_length_226_cov_1.468927_g35333_i0 PRJNA846486 35429 226 1.468927 3.31977502 Linnemannia elongata 310910 Fungi Fungi 81.6 5.59e-16   NR KAF9339702.1 310910 g35333 i0 55.8 1.02212389380531 77 32 99.6 1 2 226 383 459 KAF9339702.1 glycine hydroxymethyltransferase shm1 [Linnemannia elongata] diamond 231 81.6 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Linnemannia Linnemannia elongata
29462777 29462777 PRJNA846486_P_NODE_51930_length_195_cov_1.424658_g51834_i0 PRJNA846486 51930 195 1.424658 2.7780831 root 1 Root_unresolved Root_unresolved 55.1 8.75e-7   NR RIB27474.1 44941 g51834 i0 47.6 5.95384615384615 63 33 96.9 0 195 7 223 285 RIB27474.1 peptidase S8/S53 domain-containing protein [Gigaspora rosea] diamond 1161 55.5 0.992792792792793 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora rosea
29494722 29494722 PRJNA846486_P_NODE_39050_length_217_cov_2.226190_g38954_i0 PRJNA846486 39050 217 2.22619 4.8308323 Diversispora 308926 Fungi Fungi 93.2 1.94e-20   NR CAG8484129.1 1213867 g38954 i0 62 6.87096774193548 71 27 98.2 0 216 4 154 224 CAG8484129.1 3620_t:CDS:2 [Diversispora eburnea] diamond 1491 93.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Diversisporaceae Diversispora Diversispora eburnea
30054596 30054596 PRJNA846486_P_NODE_58991_length_186_cov_1.489051_g58895_i0 PRJNA846486 58991 186 1.489051 2.76963486 Rhizophagus irregularis 588596 Fungi Fungi 43.9 0.00665   NR PKY12589.1 588596 g58895 i0 34.4 0.983870967741935 61 37 98.4 2 3 185 286 343 PKY12589.1 guanine nucleotide-binding protein alpha subunit [Rhizophagus irregularis] diamond 183 43.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
31540233 31540233 PRJNA846486_P_NODE_33096_length_232_cov_1.420765_g33000_i0 PRJNA846486 33096 232 1.420765 3.2961748 Dentiscutata erythropus 1348616 Fungi Fungi 72.4 1.14e-12   NR CAG8742616.1 1348616 g33000 i0 51.9 0.995689655172414 77 36 99.6 1 231 1 143 218 CAG8742616.1 25362_t:CDS:10, partial [Dentiscutata erythropus] diamond 231 72.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Dentiscutata Dentiscutata erythropus
31856339 31856339 PRJNA846486_P_NODE_28017_length_248_cov_1.778894_g27921_i0 PRJNA846486 28017 248 1.778894 4.41165712 Dentiscutata erythropus 1348616 Fungi Fungi 42.4 0.0114   NR CAG8690333.1 1348616 g27921 i0 36.2 0.834677419354839 69 44 83.5 0 215 9 24 92 CAG8690333.1 5730_t:CDS:2, partial [Dentiscutata erythropus] diamond 207 42.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Dentiscutata Dentiscutata erythropus
32204501 32204501 PRJNA846486_P_NODE_75998_length_169_cov_1.300000_g75902_i0 PRJNA846486 75998 169 1.3 2.197 Racocetra persica 160502 Fungi Fungi 67 3.13e-11   NR CAG8519775.1 160502 g75902 i0 53.6 1.98816568047337 56 25 97.6 1 168 4 82 137 CAG8519775.1 10615_t:CDS:2, partial [Racocetra persica] diamond 336 67 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Racocetra Racocetra persica

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;