RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA846486", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA846486 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29865192 29865192 PRJNA846486_P_NODE_83531_length_166_cov_0.888889_g83435_i0 PRJNA846486 83531 166 0.888889 1.47555574 Pyramidobacter piscolens 638849 Bacteria Bacteria 47.4 2.77e-4   NR WP_156797548.1 638849 g83435 i0 43.5 1.66265060240964 46 26 83.1 0 165 28 6 51 WP_156797548.1 ankyrin repeat domain-containing protein, partial [Pyramidobacter piscolens] diamond 276 47.4 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Pyramidobacter Pyramidobacter piscolens
32646664 32646664 PRJNA846486_P_NODE_91600_length_163_cov_0.912281_g91504_i0 PRJNA846486 91600 163 0.912281 1.48701803 uncultured Cloacibacillus sp. 889794 Bacteria Bacteria 64.7 4.43e-11   NR WP_294191848.1 889794 g91504 i0 55.8 0.957055214723926 52 23 95.7 0 8 163 39 90 WP_294191848.1 N-acetylmuramoyl-L-alanine amidase family protein [uncultured Cloacibacillus sp.] diamond 156 64.7 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Cloacibacillus uncultured Cloacibacillus sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;