RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA846486", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA846486 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26991253 26991253 PRJNA846486_P_NODE_84242_length_166_cov_0.888889_g84146_i0 PRJNA846486 84242 166 0.888889 1.47555574 Sycon ciliatum 27933 Porifera other_Eukaryota 50.4 2.55e-5   NR XP_065191904.1 27933 g84146 i0 51 1.8433734939759 51 25 92.2 0 165 13 1611 1661 XP_065191904.1 uncharacterized protein LOC135822994 [Sycon ciliatum] diamond 306 50.4 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
29179136 29179136 PRJNA846486_P_NODE_55169_length_191_cov_1.098592_g55073_i0 PRJNA846486 55169 191 1.098592 2.09831072 Demospongiae 6042 Porifera other_Eukaryota 52.4 7.38e-6   NR XP_064399935.1 6063 g55073 i0 42.6 2.87434554973822 61 35 95.8 0 186 4 455 515 XP_064399935.1 uncharacterized protein LOC135346290 [Halichondria panicea] diamond 549 52.4 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;