RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA846486", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA846486 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28634062 28634062 PRJNA846486_P_NODE_67447_length_177_cov_1.179688_g67351_i0 PRJNA846486 67447 177 1.179688 2.08804776 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 52 8.48e-6   NR HEY4028119.1 2052315 g67351 i0 46 6.79661016949153 50 27 84.7 0 19 168 56 105 HEY4028119.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 1203 52 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29770338 29770338 PRJNA846486_P_NODE_79611_length_168_cov_0.873950_g79515_i0 PRJNA846486 79611 168 0.87395 1.468236 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 90.9 1.41e-20   NR HXA85772.1 2052315 g79515 i0 81.8 0.982142857142857 55 10 98.2 0 2 166 171 225 HXA85772.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 165 90.9 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31769876 31769876 PRJNA846486_P_NODE_78857_length_168_cov_0.873950_g78761_i0 PRJNA846486 78857 168 0.87395 1.468236 Bacillati 1783272 Bacteria Bacteria 57.4 8.61e-8   NR HVD02752.1 2052315 g78761 i0 44.4 6.75 54 30 96.4 0 167 6 191 244 HVD02752.1 tyrosine-type recombinase/integrase [Candidatus Dormiibacterota bacterium] diamond 1134 57.8 0.993079584775087 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;