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contig_metadata

31 rows where bioproject = "PRJNA846486", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 31 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 31 ✖

bioproject 1

  • PRJNA846486 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1231409 1231409 PRJNA846486_P_NODE_33901_length_230_cov_1.149171_g33805_i0 PRJNA846486 33901 230 1.149171 2.6430933 Propanagrolaimus 1510670 Nematoda Nematoda 113 9.29e-21   NTclustered gi|662563250|gb|KJ434174.1| 1519088 g33805 i0 84.034 33.9086956521739 119 17 52 2 112 230 1341 1225 Propanagrolaimus sp. LC91 28S ribosomal RNA gene, partial sequence blastn 7799 113 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Propanagrolaimus Propanagrolaimus sp. LC91
2108664 2108664 PRJNA846486_P_NODE_23182_length_269_cov_1.322727_g23086_i0 PRJNA846486 23182 269 1.322727 3.55813563 Pristionchus sp. 15 RS5229 452809 Nematoda Nematoda 196 1.08e-45   NTclustered gi|150982261|gb|EF634719.1| 452809 g23086 i0 82.805 8.6728624535316 221 34 81 4 2 220 248 30 Pristionchus sp. 15 RS5229 large subunit ribosomal protein 30 (rpl-30) mRNA, partial cds blastn 2333 196 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus sp. 15 RS5229
2108823 2108823 PRJNA846486_P_NODE_93442_length_162_cov_0.920354_g93346_i0 PRJNA846486 93442 162 0.920354 1.49097348 Metazoa 33208 Nematoda Nematoda 113 1.4e-27   NR NP_001076760.1 6239 g93346 i0 98.1 103.055555555556 53 1 98.1 0 160 2 209 261 NP_001076760.1 Serine/threonine kinase SAD-1 [Caenorhabditis elegans] diamond 16695 114 0.991228070175439 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
9761356 9761356 PRJNA846486_P_NODE_69348_length_175_cov_1.238095_g69252_i0 PRJNA846486 69348 175 1.238095 2.16666625 Caenorhabditis elegans 6239 Nematoda Nematoda 309 7.920000000000001e-80   NTclustered gi|413006566|emb|Z92784.2| 6239 g69252 i0 99.412 25.8514285714286 170 1 97 0 1 170 28779 28610 Caenorhabditis elegans Cosmid F31C3, complete sequence blastn 4524 309 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
13985223 13985223 PRJNA846486_P_NODE_44991_length_206_cov_1.242038_g44895_i0 PRJNA846486 44991 206 1.242038 2.55859828 Panagrolaimus 55784 Nematoda Nematoda 182 2.2e-41   NTclustered gi|221327484|gb|FJ591015.1| 310956 g44895 i0 82.857 3.05825242718447 210 29 100 6 1 206 346 140 Panagrolaimus detritophagus 28S ribosomal RNA gene, partial sequence blastn 630 182 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Panagrolaimus Panagrolaimus detritophagus
19959613 19959613 PRJNA846486_P_NODE_18876_length_293_cov_1.647541_g18780_i0 PRJNA846486 18876 293 1.647541 4.82729513 Caenorhabditis briggsae 6238 Nematoda Nematoda 300 8.790000000000001e-77   NTclustered gi|268559799|ref|XM_002646027.1| 6238 g18780 i0 87.938 90.8634812286689 257 27 87 4 36 290 1307 1053 Caenorhabditis briggsae Protein CBG07939 (CBG07939), partial mRNA blastn 26623 300 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
27023128 27023128 PRJNA846486_P_NODE_79642_length_168_cov_0.873950_g79546_i0 PRJNA846486 79642 168 0.87395 1.468236 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 42.7 0.0123   NR KAE9547833.1 2598192 g79546 i0 46.3 0.732142857142857 41 22 73.2 0 3 125 189 229 KAE9547833.1 hypothetical protein FO519_008953 [Halicephalobus sp. NKZ332] diamond 123 42.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
27181007 27181007 PRJNA846486_P_NODE_86002_length_165_cov_0.896552_g85906_i0 PRJNA846486 86002 165 0.896552 1.4793108 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 42.7 0.013   NR KAE9553531.1 2598192 g85906 i0 41.3 0.836363636363636 46 27 83.6 0 2 139 488 533 KAE9553531.1 hypothetical protein FO519_003280 [Halicephalobus sp. NKZ332] diamond 138 42.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
27181008 27181008 PRJNA846486_P_NODE_86642_length_165_cov_0.896552_g86546_i0 PRJNA846486 86642 165 0.896552 1.4793108 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 78.2 4.21e-16   NR KAE9548546.1 2598192 g86546 i0 70.2 0.854545454545454 47 14 85.5 0 1 141 153 199 KAE9548546.1 hypothetical protein FO519_008239 [Halicephalobus sp. NKZ332] diamond 141 78.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
27307824 27307824 PRJNA846486_P_NODE_57323_length_188_cov_1.496403_g57227_i0 PRJNA846486 57323 188 1.496403 2.81323764 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 113 5.11e-28   NR KAE9555851.1 2598192 g57227 i0 82.3 0.98936170212766 62 11 98.9 0 187 2 137 198 KAE9555851.1 hypothetical protein FO519_000936 [Halicephalobus sp. NKZ332] diamond 186 113 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
27307828 27307828 PRJNA846486_P_NODE_77443_length_169_cov_0.866667_g77347_i0 PRJNA846486 77443 169 0.866667 1.46466723 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 65.5 1.27e-10   NR KAE9552336.1 2598192 g77347 i0 51.9 0.958579881656805 54 26 95.9 0 164 3 333 386 KAE9552336.1 hypothetical protein FO519_004461 [Halicephalobus sp. NKZ332] diamond 162 65.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
27560121 27560121 PRJNA846486_P_NODE_81484_length_167_cov_0.881356_g81388_i0 PRJNA846486 81484 167 0.881356 1.47186452 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 50.1 3.43e-5   NR KAE9553388.1 2598192 g81388 i0 80 0.449101796407186 25 5 44.9 0 91 165 15 39 KAE9553388.1 hypothetical protein FO519_003398 [Halicephalobus sp. NKZ332] diamond 75 50.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
27686949 27686949 PRJNA846486_P_NODE_76884_length_169_cov_0.866667_g76788_i0 PRJNA846486 76884 169 0.866667 1.46466723 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 65.1 1.82e-10   NR KAE9553311.1 2598192 g76788 i0 65.9 0.727810650887574 41 14 72.8 0 132 10 520 560 KAE9553311.1 hypothetical protein FO519_003477 [Halicephalobus sp. NKZ332] diamond 123 65.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
27718598 27718598 PRJNA846486_P_NODE_62424_length_182_cov_1.481203_g62328_i0 PRJNA846486 62424 182 1.481203 2.69578946 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 84 4.91e-17   NR KAE9553305.1 2598192 g62328 i0 68.3 0.989010989010989 60 19 98.9 0 181 2 48 107 KAE9553305.1 hypothetical protein FO519_003471 [Halicephalobus sp. NKZ332] diamond 180 84 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
27718601 27718601 PRJNA846486_P_NODE_81264_length_167_cov_0.881356_g81168_i0 PRJNA846486 81264 167 0.881356 1.47186452 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 55.5 4.3e-7   NR KAE9552737.1 2598192 g81168 i0 58.7 0.826347305389222 46 18 82.6 1 165 28 546 590 KAE9552737.1 hypothetical protein FO519_004054 [Halicephalobus sp. NKZ332] diamond 138 55.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
27907345 27907345 PRJNA846486_P_NODE_84505_length_166_cov_0.888889_g84409_i0 PRJNA846486 84505 166 0.888889 1.47555574 Wuchereria bancrofti 6293 Nematoda Nematoda 51.6 9.95e-6   NR VDM09056.1 6293 g84409 i0 84.6 1.01204819277108 26 4 47 0 166 89 805 830 VDM09056.1 unnamed protein product [Wuchereria bancrofti] diamond 168 51.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Wuchereria Wuchereria bancrofti
27939322 27939322 PRJNA846486_P_NODE_71945_length_172_cov_2.626016_g71849_i0 PRJNA846486 71945 172 2.626016 4.51674752 Trichuris suis 68888 Nematoda Nematoda 41.2 0.0412   NR KFD66449.1 68888 g71849 i0 55.2 1.01162790697674 29 13 50.6 0 12 98 53 81 KFD66449.1 hypothetical protein M514_05835 [Trichuris suis] diamond 174 41.2 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
28412874 28412874 PRJNA846486_P_NODE_90846_length_163_cov_0.912281_g90750_i0 PRJNA846486 90846 163 0.912281 1.48701803 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 94.7 6.170000000000001e-21   NR KAE9548536.1 2598192 g90750 i0 88.7 0.975460122699387 53 6 97.5 0 159 1 276 328 KAE9548536.1 hypothetical protein FO519_008250 [Halicephalobus sp. NKZ332] diamond 159 94.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
28539332 28539332 PRJNA846486_P_NODE_88327_length_164_cov_0.904348_g88231_i0 PRJNA846486 88327 164 0.904348 1.48313072 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 56.2 2.21e-7   NR KAE9551450.1 2598192 g88231 i0 66.7 0.658536585365854 36 12 65.9 0 164 57 147 182 KAE9551450.1 hypothetical protein FO519_005351 [Halicephalobus sp. NKZ332] diamond 108 56.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
28760023 28760023 PRJNA846486_P_NODE_78767_length_168_cov_0.873950_g78671_i0 PRJNA846486 78767 168 0.87395 1.468236 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 95.9 2.5300000000000003e-21   NR KAE9554526.1 2598192 g78671 i0 90.9 0.982142857142857 55 5 98.2 0 167 3 1827 1881 KAE9554526.1 hypothetical protein FO519_002282 [Halicephalobus sp. NKZ332] diamond 165 95.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
29328378 29328378 PRJNA846486_P_NODE_93629_length_162_cov_0.920354_g93533_i0 PRJNA846486 93629 162 0.920354 1.49097348 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 78.2 4.03e-15   NR KAE9555219.1 2598192 g93533 i0 75.9 1 54 12 98.1 1 162 4 403 456 KAE9555219.1 hypothetical protein FO519_001569 [Halicephalobus sp. NKZ332] diamond 162 78.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
29360083 29360083 PRJNA846486_P_NODE_59909_length_185_cov_1.264706_g59813_i0 PRJNA846486 59909 185 1.264706 2.3397061 Toxocara canis 6265 Nematoda Nematoda 80.1 1.12e-15   NR KHN83337.1 6265 g59813 i0 60.7 0.989189189189189 61 23 98.9 1 1 183 371 430 KHN83337.1 putative cytochrome P450 CYP44 [Toxocara canis] diamond 183 80.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
29959966 29959966 PRJNA846486_P_NODE_94131_length_162_cov_0.920354_g94035_i0 PRJNA846486 94131 162 0.920354 1.49097348 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 96.7 1.3e-21   NR KAE9547689.1 2598192 g94035 i0 81.5 1 54 10 100 0 1 162 833 886 KAE9547689.1 hypothetical protein FO519_009097, partial [Halicephalobus sp. NKZ332] diamond 162 96.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
30465798 30465798 PRJNA846486_P_NODE_70213_length_174_cov_1.448000_g70117_i0 PRJNA846486 70213 174 1.448 2.51952 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 91.3 1.16e-19   NR KAE9549794.1 2598192 g70117 i0 78.6 0.96551724137931 56 12 96.6 0 170 3 485 540 KAE9549794.1 hypothetical protein FO519_007002 [Halicephalobus sp. NKZ332] diamond 168 91.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
30876239 30876239 PRJNA846486_P_NODE_76634_length_169_cov_0.866667_g76538_i0 PRJNA846486 76634 169 0.866667 1.46466723 Mesorhabditis spiculigera 96644 Nematoda Nematoda 84.7 1.8e-17   NR CAJ0582497.1 96644 g76538 i0 64.8 0.958579881656805 54 19 95.9 0 162 1 281 334 CAJ0582497.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 162 84.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
31191849 31191849 PRJNA846486_P_NODE_75535_length_169_cov_1.733333_g75439_i0 PRJNA846486 75535 169 1.733333 2.92933277 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 105 7.9999999999999985e-25   NR KAE9554711.1 2598192 g75439 i0 91.1 0.994082840236686 56 5 99.4 0 2 169 498 553 KAE9554711.1 hypothetical protein FO519_002121 [Halicephalobus sp. NKZ332] diamond 168 105 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
31286950 31286950 PRJNA846486_P_NODE_83595_length_166_cov_0.888889_g83499_i0 PRJNA846486 83595 166 0.888889 1.47555574 Ditylenchus destructor 166010 Nematoda Nematoda 55.8 2.64e-7   NR KAI1701259.1 166010 g83499 i0 52.7 1.98795180722892 55 26 99.4 0 2 166 51 105 KAI1701259.1 serpentine type 7TM GPCR chemoreceptor srsx domain-containing protein [Ditylenchus destructor] diamond 330 55.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
31318638 31318638 PRJNA846486_P_NODE_95455_length_158_cov_2.036697_g95359_i0 PRJNA846486 95455 158 2.036697 3.21798126 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 60.5 6.42e-9   NR KAE9556626.1 2598192 g95359 i0 52.3 1.67088607594937 44 21 83.5 0 133 2 278 321 KAE9556626.1 hypothetical protein FO519_000032 [Halicephalobus sp. NKZ332] diamond 264 60.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
32014610 32014610 PRJNA846486_P_NODE_91378_length_163_cov_0.912281_g91282_i0 PRJNA846486 91378 163 0.912281 1.48701803 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 104 1.7999999999999997e-24   NR KAE9553666.1 2598192 g91282 i0 83 0.975460122699387 53 9 97.5 0 161 3 326 378 KAE9553666.1 hypothetical protein FO519_003114 [Halicephalobus sp. NKZ332] diamond 159 104 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
32173029 32173029 PRJNA846486_P_NODE_82158_length_167_cov_0.881356_g82062_i0 PRJNA846486 82158 167 0.881356 1.47186452 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 102 1.53e-23   NR KAE9550646.1 2598192 g82062 i0 81.8 2.96407185628743 55 10 98.8 0 165 1 260 314 KAE9550646.1 hypothetical protein FO519_006140 [Halicephalobus sp. NKZ332] diamond 495 102 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
32709931 32709931 PRJNA846486_P_NODE_81620_length_167_cov_0.881356_g81524_i0 PRJNA846486 81620 167 0.881356 1.47186452 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 57 7.14e-8   NR KAE9549670.1 2598192 g81524 i0 100 0.467065868263473 26 0 46.7 0 80 3 192 217 KAE9549670.1 hypothetical protein FO519_007112 [Halicephalobus sp. NKZ332] diamond 78 57 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;