RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA846486", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA846486 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27497247 27497247 PRJNA846486_P_NODE_81383_length_167_cov_0.881356_g81287_i0 PRJNA846486 81383 167 0.881356 1.47186452 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 81.6 2.56e-16   NR MCK9281959.1 2614255 g81287 i0 81 0.754491017964072 42 8 75.4 0 167 42 331 372 MCK9281959.1 hypothetical protein [Melioribacteraceae bacterium] diamond 126 81.6 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium
27497248 27497248 PRJNA846486_P_NODE_91343_length_163_cov_0.912281_g91247_i0 PRJNA846486 91343 163 0.912281 1.48701803 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 45.1 2.12e-4   NR RPI07171.1 2026749 g91247 i0 61.8 0.625766871165644 34 13 62.6 0 108 7 17 50 RPI07171.1 MAG: hypothetical protein EHM64_00225 [Ignavibacteriota bacterium] diamond 102 45.1 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
28097027 28097027 PRJNA846486_P_NODE_83665_length_166_cov_0.888889_g83569_i0 PRJNA846486 83665 166 0.888889 1.47555574 Ignavibacteria bacterium 2053306 Bacteria Bacteria 50.4 2.53e-5   NR MBK7578529.1 2053306 g83569 i0 44.9 0.885542168674699 49 27 88.6 0 166 20 82 130 MBK7578529.1 phage portal protein [Ignavibacteria bacterium] diamond 147 50.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
32552815 32552815 PRJNA846486_P_NODE_91359_length_163_cov_0.912281_g91263_i0 PRJNA846486 91359 163 0.912281 1.48701803 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 55.8 2.91e-7   NR MBV6513856.1 2651163 g91263 i0 67.5 0.736196319018405 40 12 71.8 1 8 124 3 42 MBV6513856.1 DNA primase [Ignavibacteriaceae bacterium] diamond 120 55.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;