RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA846486", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA846486 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30371177 30371177 PRJNA846486_P_NODE_72472_length_172_cov_1.268293_g72376_i0 PRJNA846486 72472 172 1.268293 2.18146396 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 82.4 5.68e-17   NR MBX3179226.1 2030809 g72376 i0 63.2 0.994186046511628 57 21 99.4 0 172 2 167 223 MBX3179226.1 TIGR01777 family oxidoreductase [Candidatus Hydrogenedentota bacterium] diamond 171 82.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32014605 32014605 PRJNA846486_P_NODE_56478_length_189_cov_1.485714_g56382_i0 PRJNA846486 56478 189 1.485714 2.80799946 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 47.8 2.7e-4   NR GMW03994.1 2030809 g56382 i0 51.2 0.682539682539683 43 21 68.3 0 26 154 148 190 GMW03994.1 MAG: hypothetical protein AMXMBFR84_51280 [Candidatus Hydrogenedentota bacterium] diamond 129 47.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;