RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA846486", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA846486 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27844274 27844274 PRJNA846486_P_NODE_76764_length_169_cov_0.866667_g76668_i0 PRJNA846486 76764 169 0.866667 1.46466723 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 70.5 9.17e-13   NR MFN8599903.1 2838779 g76668 i0 84.6 0.692307692307692 39 6 69.2 0 169 53 212 250 MFN8599903.1 ceramidase domain-containing protein [Candidatus Binatia bacterium] diamond 117 70.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30876238 30876238 PRJNA846486_P_NODE_69454_length_175_cov_1.174603_g69358_i0 PRJNA846486 69454 175 1.174603 2.05555525 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 92.8 1.16e-21   NR HJW68568.1 2838779 g69358 i0 79.6 3.73714285714286 54 11 92.6 0 171 10 122 175 HJW68568.1 DJ-1/PfpI family protein [Candidatus Binatia bacterium] diamond 654 92.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31856348 31856348 PRJNA846486_P_NODE_86817_length_165_cov_0.896552_g86721_i0 PRJNA846486 86817 165 0.896552 1.4793108 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 69.7 2.36e-13   NR HEY1849719.1 2785449 g86721 i0 71.1 0.818181818181818 45 13 81.8 0 164 30 96 140 HEY1849719.1 site-specific DNA-methyltransferase [Candidatus Binataceae bacterium] diamond 135 69.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;