RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA846110", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA846110 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7211056 7211056 PRJNA846110_P_NODE_12226_length_311_cov_5.714286_g11981_i0 PRJNA846110 12226 311 5.714286 17.77142946 Ptychodera flava 63121 Hemichordata other_Eukaryota 172 2.14e-38   NTclustered gi|2875680481|ref|XM_070725062.1| 63121 g11981 i0 81.863 1.84565916398714 204 37 66 0 58 261 138 341 PREDICTED: Ptychodera flava large ribosomal subunit protein eL38 (LOC139151988), mRNA blastn 574 172 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
19959568 19959568 PRJNA846110_P_NODE_4256_length_504_cov_1.443155_g4012_i0 PRJNA846110 4256 504 1.443155 7.2735012 Ptychodera flava 63121 Hemichordata other_Eukaryota 296 2.06e-75   NTclustered gi|2875751398|ref|XM_070705969.1| 63121 g4012 i0 81.319 11.827380952381 364 68 72 0 141 504 772 409 PREDICTED: Ptychodera flava cell division control protein 42 homolog (LOC139137721), mRNA blastn 5961 296 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;