RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA846110", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA846110 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9760990 9760990 PRJNA846110_P_NODE_12848_length_305_cov_2.086207_g12603_i0 PRJNA846110 12848 305 2.086207 6.36293135 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 226 1.58e-54   NTclustered gi|1620114052|ref|XM_028670187.1| 5849 g12603 i0 83.401 20.783606557377 247 38 81 3 27 272 704 460 Plasmodium gallinaceum tubulin beta chain, putative (PGAL8A_00384800), partial mRNA blastn 6339 226 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
29494721 29494721 PRJNA846110_P_NODE_26730_length_246_cov_0.884393_g26485_i0 PRJNA846110 26730 246 0.884393 2.17560678 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 46.2 0.00229   NR UKJ88767.2 68886 g26485 i0 43.3 1.47560975609756 60 23 73.2 2 66 245 397 445 UKJ88767.2 hypothetical protein MACJ_002013 [Theileria orientalis] diamond 363 46.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;