RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA846110" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA846110 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27939305 27939305 PRJNA846110_P_NODE_27425_length_245_cov_0.895349_g27180_i0 PRJNA846110 27425 245 0.895349 2.19360505 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 69.3 2.32e-12   NR PLS80849.1 2026720 g27180 i0 50 1.00408163265306 82 33 96.7 3 244 8 91 167 PLS80849.1 MAG: hypothetical protein CYG49_03730 [Candidatus Saccharibacteria bacterium] diamond 246 69.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29801967 29801967 PRJNA846110_P_NODE_26111_length_246_cov_1.335260_g25866_i0 PRJNA846110 26111 246 1.33526 3.2847396 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 143 1.98e-39   NR MBH1956961.1 2026720 g25866 i0 81.7 3 82 15 100 0 1 246 140 221 MBH1956961.1 mannose-1-phosphate guanylyltransferase [Candidatus Saccharibacteria bacterium] diamond 738 143 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29991611 29991611 PRJNA846110_P_NODE_20491_length_261_cov_1.101064_g20246_i0 PRJNA846110 20491 261 1.101064 2.87377704 Candidatus Binatus sp. 2811406 Bacteria Bacteria 43.1 0.0321   NR HYR95454.1 2811406 g20246 i0 29.9 0.770114942528736 67 45 74.7 1 21 215 238 304 HYR95454.1 M24 family metallopeptidase [Candidatus Binatus sp.] diamond 201 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae Candidatus Binatus Candidatus Binatus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;