RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA846086" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA846086 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16135593 16135593 PRJNA846086_P_NODE_4433_length_245_cov_1.656977_g4367_i0 PRJNA846086 4433 245 1.656977 4.05959365 Glomeraceae 36751 Fungi Fungi 72.4 1.36e-12   NR CAG8654883.1 27381 g4367 i0 50.6 4.95918367346939 81 40 99.2 0 243 1 324 404 CAG8654883.1 406_t:CDS:10, partial [Funneliformis mosseae] diamond 1215 72.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Funneliformis Funneliformis mosseae
32109515 32109515 PRJNA846086_P_NODE_3238_length_250_cov_1.717514_g3172_i0 PRJNA846086 3238 250 1.717514 4.293785 Linnemannia zychae 979765 Fungi Fungi 43.5 0.0211   NR KAF9902863.1 979765 g3172 i0 32.5 1.836 77 51 91.2 1 249 22 110 186 KAF9902863.1 GDP-mannose transporter into the lumen of the Golgi [Linnemannia zychae] diamond 459 43.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Linnemannia Linnemannia zychae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;