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contig_metadata

17 rows where bioproject = "PRJNA841653" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 17 ✖

bioproject 1

  • PRJNA841653 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
830832 830832 PRJNA841653_P_NODE_53161_length_246_cov_0.890173_g52487_i0 PRJNA841653 53161 246 0.890173 2.18982558 Halorubrum hochsteinianum 2949307 Archaea Archaea 100 7.82e-17   NTclustered gi|2251941869|gb|CP098415.1| 2949307 g52487 i0 89.744 0.317073170731707 78 8 32 0 169 246 1853616 1853539 Halorubrum hochsteinianum strain 1-13-28 chromosome, complete genome blastn 78 100 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum hochsteinianum
4658909 4658909 PRJNA841653_P_NODE_35144_length_277_cov_1.411765_g34470_i0 PRJNA841653 35144 277 1.411765 3.91058905 Halorubrum salinarum 2739057 Archaea Archaea 119 2.48e-22   NTclustered gi|1848526000|gb|CP053941.1| 2739057 g34470 i0 81.818 0.516245487364621 143 24 51 2 113 254 2261089 2261230 Halorubrum salinarum strain RHB-C chromosome, complete genome blastn 143 119 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum salinarum
19957115 19957115 PRJNA841653_P_NODE_43996_length_251_cov_0.865169_g43322_i0 PRJNA841653 43996 251 0.865169 2.17157419 Methanobrevibacter sp. YE315 1609968 Archaea Archaea 198 2.76e-46   NTclustered gi|985614202|gb|CP010834.1| 1609968 g43322 i0 81.59 0.952191235059761 239 44 95 0 5 243 584731 584969 Methanobrevibacter sp. YE315, complete genome blastn 239 198 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. YE315
22507626 22507626 PRJNA841653_P_NODE_50878_length_247_cov_0.885057_g50204_i0 PRJNA841653 50878 247 0.885057 2.18609079 Halovalidus salilacus 3075124 Archaea Archaea 52.8 0.022   NTclustered gi|2581323319|gb|CP134700.1| 3075124 g50204 i0 96.875 5.38866396761134 32 0 13 1 139 169 896898 896867 Halovalidus salilacus strain CCL63 chromosome, complete genome blastn 1331 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halovalidus Halovalidus salilacus
25056320 25056320 PRJNA841653_P_NODE_19160_length_373_cov_1.016667_g18488_i0 PRJNA841653 19160 373 1.016667 3.79216791 uncultured Methanoregula sp. 1005933 Archaea Archaea 508 1.75e-139   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g18488 i0 91.803 95.1447721179625 366 28 98 2 9 373 3146930 3147294 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 35489 508 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
27149055 27149055 PRJNA841653_P_NODE_24542_length_329_cov_1.496094_g23868_i0 PRJNA841653 24542 329 1.496094 4.92214926 Nitrososphaera sp. 1971748 Archaea Archaea 43.9 0.00407   NR MCI0559232.1 1971748 g23868 i0 46 0.455927051671733 50 26 45.6 1 93 242 22 70 MCI0559232.1 hypothetical protein [Nitrososphaera sp.] diamond 150 43.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
28349553 28349553 PRJNA841653_P_NODE_49246_length_248_cov_0.880000_g48572_i0 PRJNA841653 49246 248 0.88 2.1824 Natronococcus sp. 35747 Archaea Archaea 42.7 0.0193   NR WP_416283822.1 35747 g48572 i0 53.5 0.520161290322581 43 19 50.8 1 248 123 96 138 WP_416283822.1 helix-turn-helix domain-containing protein [Natronococcus sp.] diamond 129 42.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronococcus Natronococcus sp.
30465737 30465737 PRJNA841653_P_NODE_46593_length_249_cov_1.335227_g45919_i0 PRJNA841653 46593 249 1.335227 3.32471523 Candidatus Heimdallarchaeota archaeon 2026747 Archaea Archaea 46.6 0.00168   NR UCG04066.1 2026747 g45919 i0 33.3 0.975903614457831 81 45 90.4 4 19 243 56 133 UCG04066.1 MAG: GTP-binding protein [Candidatus Heimdallarchaeota archaeon] diamond 243 46.6 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon
30654893 30654893 PRJNA841653_P_NODE_64073_length_225_cov_17.598684_g63399_i0 PRJNA841653 64073 225 17.598684 39.597039 Nanobdellota archaeon 2026764 Archaea Archaea 116 4.359999999999999e-32   NR MCA9460427.1 2026764 g63399 i0 86.3 0.973333333333333 73 10 97.3 0 221 3 3 75 MCA9460427.1 hypothetical protein [Nanoarchaeota archaeon] diamond 219 116 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
31002641 31002641 PRJNA841653_P_NODE_53934_length_245_cov_0.895349_g53260_i0 PRJNA841653 53934 245 0.895349 2.19360505 archaeon 1906665 Archaea Archaea 63.2 2.48e-9   NR MDP2438677.1 1906665 g53260 i0 42.3 0.869387755102041 71 41 86.9 0 244 32 863 933 MDP2438677.1 RasGEF domain-containing protein [archaeon] diamond 213 63.2 1 Archaea               archaeon
31223563 31223563 PRJNA841653_P_NODE_56415_length_244_cov_0.900585_g55741_i0 PRJNA841653 56415 244 0.900585 2.1974274 Candidatus Poseidonia alphae 1915863 Archaea Archaea 126 4.9099999999999996e-32   NR MDA7464148.1 1915863 g55741 i0 75.9 0.971311475409836 79 19 97.1 0 2 238 132 210 MDA7464148.1 hypothetical protein [Candidatus Poseidonia alphae] diamond 237 126 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae Candidatus Poseidonia Candidatus Poseidonia alphae
31382024 31382024 PRJNA841653_P_NODE_58716_length_243_cov_0.905882_g58042_i0 PRJNA841653 58716 243 0.905882 2.20129326 Nitrososphaerales archaeon 2268197 Archaea Archaea 82 1.28e-16   NR MFI5405227.1 2268197 g58042 i0 53.4 0.716049382716049 58 27 71.6 0 41 214 5 62 MFI5405227.1 hypothetical protein [Nitrososphaerales archaeon] diamond 174 82 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
31476973 31476973 PRJNA841653_P_NODE_62376_length_241_cov_0.916667_g61702_i0 PRJNA841653 62376 241 0.916667 2.20916747 archaeon 1906665 Archaea Archaea 59.3 5.46e-8   NR RYH18455.1 1906665 g61702 i0 42.3 0.883817427385892 71 41 88.4 0 214 2 913 983 RYH18455.1 MAG: hypothetical protein EON65_27185, partial [archaeon] diamond 213 59.3 1 Archaea               archaeon
32204406 32204406 PRJNA841653_P_NODE_14558_length_431_cov_1.899441_g13887_i0 PRJNA841653 14558 431 1.899441 8.18659071 Halobacteriota archaeon 3100168 Archaea Archaea 55.8 7.81e-6   NR MDY6957599.1 3100168 g13887 i0 37.9 0.605568445475638 87 42 59.2 2 171 425 1046 1122 MDY6957599.1 hypothetical protein [Halobacteriota archaeon] diamond 261 55.8 1 Archaea   Methanobacteriati Halobacteriota         Halobacteriota archaeon
32299679 32299679 PRJNA841653_P_NODE_55419_length_244_cov_1.701754_g54745_i0 PRJNA841653 55419 244 1.701754 4.15227976 Methanocaldococcus villosus 667126 Archaea Archaea 55.5 2.89e-7   NR WP_004592618.1 667126 g54745 i0 42.5 3.9344262295082 80 28 98.4 2 2 241 69 130 WP_004592618.1 30S ribosomal protein S19e [Methanocaldococcus villosus] diamond 960 55.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus villosus
32552754 32552754 PRJNA841653_P_NODE_54539_length_245_cov_0.895349_g53865_i0 PRJNA841653 54539 245 0.895349 2.19360505 archaeon 1906665 Archaea Archaea 41.6 0.0143   NR RYG59128.1 1906665 g53865 i0 50 0.391836734693878 32 16 39.2 0 8 103 26 57 RYG59128.1 MAG: hypothetical protein EON64_20550 [archaeon] diamond 96 41.6 1 Archaea               archaeon
32898705 32898705 PRJNA841653_P_NODE_48700_length_248_cov_0.880000_g48026_i0 PRJNA841653 48700 248 0.88 2.1824 archaeon 1906665 Archaea Archaea 144 9.58e-39   NR RYG65736.1 1906665 g48026 i0 82.5 0.967741935483871 80 14 96.8 0 242 3 320 399 RYG65736.1 MAG: hypothetical protein EON64_11310, partial [archaeon] diamond 240 144 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;