RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA841653" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA841653 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27149055 27149055 PRJNA841653_P_NODE_24542_length_329_cov_1.496094_g23868_i0 PRJNA841653 24542 329 1.496094 4.92214926 Nitrososphaera sp. 1971748 Archaea Archaea 43.9 0.00407   NR MCI0559232.1 1971748 g23868 i0 46 0.455927051671733 50 26 45.6 1 93 242 22 70 MCI0559232.1 hypothetical protein [Nitrososphaera sp.] diamond 150 43.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
31382024 31382024 PRJNA841653_P_NODE_58716_length_243_cov_0.905882_g58042_i0 PRJNA841653 58716 243 0.905882 2.20129326 Nitrososphaerales archaeon 2268197 Archaea Archaea 82 1.28e-16   NR MFI5405227.1 2268197 g58042 i0 53.4 0.716049382716049 58 27 71.6 0 41 214 5 62 MFI5405227.1 hypothetical protein [Nitrososphaerales archaeon] diamond 174 82 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;