RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA841653", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Kitrinoviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA841653 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19956755 19956755 PRJNA841653_P_NODE_26996_length_314_cov_1.116183_g26322_i0 PRJNA841653 26996 314 1.116183 3.50481462 Skokie tombus-like virus 2789423 Viruses Viruses 451 2.48e-122   NTclustered gi|1933757594|gb|MW177751.1| 2789423 g26322 i0 97.71 0.834394904458599 262 6 83 0 40 301 1270 1009 Skokie tombus-like virus strain USAdp coat protein gene, partial cds blastn 262 451 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Skokie tombus-like virus
29233749 29233749 PRJNA841653_P_NODE_50909_length_247_cov_0.885057_g50235_i0 PRJNA841653 50909 247 0.885057 2.18609079 Alphaendornavirus fimbriatae-1 3029998 Viruses Viruses 62.8 3.57e-9   NR DBA06983.1 3029998 g50235 i0 35.1 0.935222672064777 77 50 93.5 0 240 10 2421 2497 DBA06983.1 TPA_asm: RNA-dependent RNA polymerase [Alphaendornavirus fimbriatae-1] diamond 231 62.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus fimbriatae-1
29865114 29865114 PRJNA841653_P_NODE_43791_length_251_cov_0.865169_g43117_i0 PRJNA841653 43791 251 0.865169 2.17157419 Oryza rufipogon alphaendornavirus 362692 Viruses Viruses 51.6 3.21e-5   NR YP_438202.1 362692 g43117 i0 45.9 1.69721115537849 61 31 71.7 2 69 248 1600 1659 YP_438202.1 polyprotein [Oryza rufipogon alphaendornavirus] diamond 426 51.6 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus rupifigonis
31856281 31856281 PRJNA841653_P_NODE_61837_length_241_cov_0.916667_g61163_i0 PRJNA841653 61837 241 0.916667 2.20916747 Sclerotinia sclerotiorum endornavirus 3 2231696 Viruses Viruses 51.6 2.71e-5   NR AWY10956.1 2231696 g61163 i0 33.3 3.33609958506224 75 50 93.4 0 237 13 451 525 AWY10956.1 polyprotein, partial [Sclerotinia sclerotiorum endornavirus 3] diamond 804 51.6 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae   Sclerotinia sclerotiorum endornavirus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;