RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

33 rows where bioproject = "PRJNA841653" and tax_phylum = "Evosea"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 33 ✖

tax_clade 1

bioproject 1

  • PRJNA841653 · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
830772 830772 PRJNA841653_P_NODE_50321_length_247_cov_0.885057_g49647_i0 PRJNA841653 50321 247 0.885057 2.18609079 Evosea 2605435 Evosea other_Eukaryota 122 2.7e-30   NR XP_020435784.1 670386 g49647 i0 78 3.95951417004049 82 18 99.6 0 2 247 401 482 XP_020435784.1 cullin A [Heterostelium album PN500] diamond 978 122 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
831033 831033 PRJNA841653_P_NODE_64401_length_206_cov_5.759398_g63727_i0 PRJNA841653 64401 206 5.759398 11.86435988 Physarum bivalve 289949 Evosea other_Eukaryota 250 5.9499999999999995e-62   NTclustered gi|381139267|emb|HE655084.1| 289949 g63727 i0 88.78 18.1941747572816 205 21 99 2 3 206 1115 1318 Physarum bivalve partial 28S rRNA gene, isolate It-IG42 blastn 3748 250 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum bivalve
1230861 1230861 PRJNA841653_P_NODE_54061_length_245_cov_0.895349_g53387_i0 PRJNA841653 54061 245 0.895349 2.19360505 Didymium 5792 Evosea other_Eukaryota 110 1.29e-19   NTclustered gi|2687|emb|X60210.1| 5793 g53387 i0 93.333 21.1061224489796 75 3 31 2 8 82 2582 2654 D.iridis LSU rRNA gene blastn 5171 110 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
2106557 2106557 PRJNA841653_P_NODE_8842_length_567_cov_3.834008_g8177_i0 PRJNA841653 8842 567 3.834008 21.73882536 Physarum polycephalum 5791 Evosea other_Eukaryota 647 0   NTclustered gi|3221|emb|V01159.1| 5791 g8177 i0 87.565 9.21516754850088 579 46 98 17 10 567 1832 2405 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 5225 647 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
3381153 3381153 PRJNA841653_P_NODE_26083_length_319_cov_2.569106_g25409_i0 PRJNA841653 26083 319 2.569106 8.19544814 Physarum polycephalum 5791 Evosea other_Eukaryota 483 8.95e-132   NTclustered gi|3221|emb|V01159.1| 5791 g25409 i0 94.34 58.1191222570533 318 13 98 4 1 313 1831 1514 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 18540 483 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
5933388 5933388 PRJNA841653_P_NODE_21505_length_351_cov_6.273381_g20831_i0 PRJNA841653 21505 351 6.273381 22.01956731 Dictyostelium discoideum 44689 Evosea other_Eukaryota 303 8.29e-78   NTclustered gi|1040460865|dbj|LC159244.1| 44689 g20831 i0 97.727 32.9088319088319 176 4 50 0 12 187 197 372 Dictyostelium discoideum genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 26S rRNA, partial and complete sequence, strain: WS-18 blastn 11551 303 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
5934201 5934201 PRJNA841653_P_NODE_64445_length_203_cov_5.292308_g63771_i0 PRJNA841653 64445 203 5.292308 10.74338524 Filamoeba nolandi 136452 Evosea other_Eukaryota 363 7.1999999999999985e-96   NTclustered gi|57546814|gb|AY714368.1| 136452 g63771 i0 100 98.0147783251231 196 0 97 0 7 202 1497 1692 Filamoeba nolandi strain CCAP1526 small subunit ribosomal RNA gene, complete sequence blastn 19897 363 1 Eukaryota Amoebozoa   Evosea Variosea     Filamoeba Filamoeba nolandi
5934223 5934223 PRJNA841653_P_NODE_7345_length_625_cov_2.295290_g6689_i0 PRJNA841653 7345 625 2.29529 14.3455625 Lycogala epidendrum 300236 Evosea other_Eukaryota 850 0   NTclustered gi|501417087|gb|JX481301.1| 300236 g6689 i0 91.143 4.4048 621 48 99 6 1 617 2444 1827 Lycogala epidendrum voucher AMFD271 18S ribosomal RNA gene, partial sequence blastn 2753 850 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Liceales Enteridiidae Lycogala Lycogala epidendrum
8483071 8483071 PRJNA841653_P_NODE_22767_length_341_cov_4.152985_g22093_i0 PRJNA841653 22767 341 4.152985 14.16167885 Cavenderia subdiscoidea 3067639 Evosea other_Eukaryota 147 1.4399999999999998e-30   NTclustered gi|2558374431|gb|OP168900.1| 3067639 g22093 i0 88.43 50.0146627565982 121 14 35 0 7 127 52829 52949 Cavenderia subdiscoidea strain TH1A voucher DSC<USA-NY>:DBS0350779 mitochondrion, complete genome blastn 17055 147 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia subdiscoidea
9758982 9758982 PRJNA841653_P_NODE_60208_length_242_cov_0.911243_g59534_i0 PRJNA841653 60208 242 0.911243 2.20520806 Dictyostelium discoideum 44689 Evosea other_Eukaryota 54.7 0.006   NTclustered gi|66827260|ref|XM_641893.1| 352472 g59534 i0 96.97 0.136363636363636 33 0 14 1 64 96 721 690 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0268812) mRNA, complete cds blastn 33 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
11034013 11034013 PRJNA841653_P_NODE_24129_length_331_cov_20.697674_g23455_i0 PRJNA841653 24129 331 20.697674 68.50930094 Filamoeba nolandi 136452 Evosea other_Eukaryota 592 1.49e-164   NTclustered gi|57546814|gb|AY714368.1| 136452 g23455 i0 99.69 60.2779456193353 323 1 98 0 1 323 1500 1178 Filamoeba nolandi strain CCAP1526 small subunit ribosomal RNA gene, complete sequence blastn 19952 592 1 Eukaryota Amoebozoa   Evosea Variosea     Filamoeba Filamoeba nolandi
11034022 11034022 PRJNA841653_P_NODE_24469_length_329_cov_5.289062_g23795_i0 PRJNA841653 24469 329 5.289062 17.40101398 Physarum sp. 31288 Evosea other_Eukaryota 564 3.2199999999999995e-156   NTclustered gi|2747358420|gb|PP951386.1| 31288 g23795 i0 98.442 96.5410334346505 321 3 98 2 9 329 96 414 Physarum sp. voucher HMJAU M20294-1 small subunit ribosomal RNA gene, partial sequence blastn 31762 564 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum sp.
11034295 11034295 PRJNA841653_P_NODE_36709_length_271_cov_20.560606_g36035_i0 PRJNA841653 36709 271 20.560606 55.71924226 Phalansterium filosum 857046 Evosea other_Eukaryota 134 8.630000000000001e-27   NTclustered gi|300078501|gb|GU001163.1| 857046 g36035 i0 91 58.9926199261993 100 7 56 2 172 271 3043 3140 Phalansterium sp. EEG-2010/THA 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15987 134 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium filosum
12310028 12310028 PRJNA841653_P_NODE_55150_length_245_cov_0.895349_g54476_i0 PRJNA841653 55150 245 0.895349 2.19360505 Dictyostelium purpureum 5786 Evosea other_Eukaryota 78.7 3.65e-10   NTclustered gi|330790854|ref|XM_003283463.1| 5786 g54476 i0 76.923 0.583673469387755 143 30 58 1 82 224 392 253 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_93471), partial mRNA blastn 143 78.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
12310138 12310138 PRJNA841653_P_NODE_61150_length_241_cov_1.184524_g60476_i0 PRJNA841653 61150 241 1.184524 2.85470284 Physarum polycephalum 5791 Evosea other_Eukaryota 263 9.21e-66   NTclustered gi|3221|emb|V01159.1| 5791 g60476 i0 90.547 3.26970954356846 201 15 82 4 39 236 5808 5609 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 788 263 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
14858302 14858302 PRJNA841653_P_NODE_28712_length_304_cov_1.303030_g28038_i0 PRJNA841653 28712 304 1.30303 3.9612112 Physarum polycephalum 5791 Evosea other_Eukaryota 154 3.13e-44   NR ABL84200.1 5791 g28038 i0 79 2.96052631578947 100 21 98.7 0 302 3 19 118 ABL84200.1 14-3-3-like protein [Physarum polycephalum] diamond 900 154 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
15258499 15258499 PRJNA841653_P_NODE_12572_length_467_cov_1.703046_g11901_i0 PRJNA841653 12572 467 1.703046 7.95322482 Physarum 5790 Evosea other_Eukaryota 475 2.27e-129   NTclustered gi|379141567|gb|JQ478431.1| 1158133 g11901 i0 85.532 100.612419700214 470 51 99 15 1 460 1070 608 Physarum pseudonotabile voucher 255438 LE 18S ribosomal RNA gene, partial sequence blastn 46986 475 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum pseudonotabile
16132850 16132850 PRJNA841653_P_NODE_18573_length_378_cov_19.832787_g17901_i0 PRJNA841653 18573 378 19.832787 74.96793486 Filamoeba nolandi 136452 Evosea other_Eukaryota 688 0   NTclustered gi|57546814|gb|AY714368.1| 136452 g17901 i0 100 97.8121693121693 372 0 98 0 1 372 408 37 Filamoeba nolandi strain CCAP1526 small subunit ribosomal RNA gene, complete sequence blastn 36973 688 1 Eukaryota Amoebozoa   Evosea Variosea     Filamoeba Filamoeba nolandi
18682185 18682185 PRJNA841653_P_NODE_55375_length_244_cov_1.766082_g54701_i0 PRJNA841653 55375 244 1.766082 4.30924008 Flamella arnhemensis 490515 Evosea other_Eukaryota 431 2.419999999999999e-116   NTclustered gi|163943978|gb|EU186022.1| 490515 g54701 i0 100 114.045081967213 233 0 95 0 1 233 341 109 Flamella arnhemensis 18S ribosomal RNA gene, partial sequence blastn 27827 431 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella arnhemensis
19082238 19082238 PRJNA841653_P_NODE_28595_length_304_cov_4.714286_g27921_i0 PRJNA841653 28595 304 4.714286 14.33142944 Physariida 5789 Evosea other_Eukaryota 300 9.16e-77   NTclustered gi|175957|gb|M19232.1|SLMRRMPP 5791 g27921 i0 84.79 29.7664473684211 309 35 99 9 1 303 355 53 Slime mold (P.polycephalum) 28S large subunit rRNA, 5' end blastn 9049 303 0.99009900990099 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
22507019 22507019 PRJNA841653_P_NODE_21478_length_352_cov_1.043011_g20804_i0 PRJNA841653 21478 352 1.043011 3.67139872 Dictyostelium discoideum 44689 Evosea other_Eukaryota 267 1.09e-66   NTclustered gi|167938|gb|M23749.1|DDIUBIQB 44689 g20804 i0 81.707 99.8125 328 52 93 8 25 350 7 328 D.discoideum ubiquitin mRNA, complete cds, clone DCUBV45 blastn 35134 267 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
23782430 23782430 PRJNA841653_P_NODE_16419_length_404_cov_3.655589_g15747_i0 PRJNA841653 16419 404 3.655589 14.76857956 Didymium spongiosum 289992 Evosea other_Eukaryota 244 5.96e-60   NTclustered gi|2161226356|gb|MZ313554.1| 289992 g15747 i0 95.425 7.33415841584158 153 7 96 0 252 404 7657 7809 Mucilago crustacea 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2963 244 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium spongiosum
25056688 25056688 PRJNA841653_P_NODE_35480_length_276_cov_1.147783_g34806_i0 PRJNA841653 35480 276 1.147783 3.16788108 Heterostelium album 2086695 Evosea other_Eukaryota 56.5 0.002   NTclustered gi|1160553238|ref|XM_020572444.1| 670386 g34806 i0 100 0.369565217391304 30 0 11 0 135 164 651 622 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 102 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
25057145 25057145 PRJNA841653_P_NODE_61380_length_241_cov_0.916667_g60706_i0 PRJNA841653 61380 241 0.916667 2.20916747 Stemonitopsis hyperopta 1115750 Evosea other_Eukaryota 311 3.24e-80   NTclustered gi|1760595250|gb|MN550931.1| 1115750 g60706 i0 90.678 29.1452282157676 236 18 97 4 9 241 163 397 Stemonitopsis hyperopta voucher 10665 small subunit ribosomal RNA gene, partial sequence blastn 7024 311 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Stemonitopsis Stemonitopsis hyperopta
26769855 26769855 PRJNA841653_P_NODE_51741_length_246_cov_1.728324_g51067_i0 PRJNA841653 51741 246 1.728324 4.25167704 Polysphondylium violaceum 133409 Evosea other_Eukaryota 59.7 4.07e-8   NR KAF2076390.1 133409 g51067 i0 42.5 0.975609756097561 80 44 97.6 2 3 242 294 371 KAF2076390.1 hypothetical protein CYY_002295 [Polysphondylium violaceum] diamond 240 59.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
26810044 26810044 PRJNA841653_P_NODE_63121_length_237_cov_2.213415_g62447_i0 PRJNA841653 63121 237 2.213415 5.24579355 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 64.3 8.68e-10   NR KYR00680.1 361077 g62447 i0 42.7 3.06329113924051 75 43 94.9 0 227 3 106 180 KYR00680.1 filopodin [Tieghemostelium lacteum] diamond 726 64.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
27054780 27054780 PRJNA841653_P_NODE_44162_length_251_cov_0.865169_g43488_i0 PRJNA841653 44162 251 0.865169 2.17157419 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 84 1.25e-16   NR PRP78361.1 1890364 g43488 i0 50.6 0.920318725099602 77 38 92 0 13 243 313 389 PRP78361.1 calcium-binding protein [Planoprotostelium fungivorum] diamond 231 84 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28728509 28728509 PRJNA841653_P_NODE_54587_length_245_cov_0.895349_g53913_i0 PRJNA841653 54587 245 0.895349 2.19360505 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 107 7.64e-25   NR PRP73583.1 1890364 g53913 i0 59.5 0.96734693877551 79 32 96.7 0 241 5 15 93 PRP73583.1 cryptochrome DASH-like [Planoprotostelium fungivorum] diamond 237 107 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29517731 29517731 PRJNA841653_P_NODE_55890_length_244_cov_0.900585_g55216_i0 PRJNA841653 55890 244 0.900585 2.1974274 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 43.5 0.0206   NR PRP77761.1 1890364 g55216 i0 36.4 0.676229508196721 55 35 67.6 0 80 244 506 560 PRP77761.1 hypothetical protein PROFUN_14122 [Planoprotostelium fungivorum] diamond 165 43.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29936872 29936872 PRJNA841653_P_NODE_60091_length_242_cov_0.911243_g59417_i0 PRJNA841653 60091 242 0.911243 2.20520806 Acytosteliales 2058181 Evosea other_Eukaryota 51.2 3.73e-5   NR XP_004359171.1 261658 g59417 i0 37 1.83471074380165 73 41 90.5 2 22 240 275 342 XP_004359171.1 uncharacterized protein DFA_01202 [Cavenderia fasciculata] diamond 444 51.6 0.992248062015504 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
31318575 31318575 PRJNA841653_P_NODE_45515_length_250_cov_0.870056_g44841_i0 PRJNA841653 45515 250 0.870056 2.17514 Dictyostelium purpureum 5786 Evosea other_Eukaryota 64.7 7.36e-10   NR XP_003289404.1 5786 g44841 i0 35.3 1.02 85 50 96 1 9 248 12 96 XP_003289404.1 component of scar regulatory complex [Dictyostelium purpureum] diamond 255 64.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32077820 32077820 PRJNA841653_P_NODE_61438_length_241_cov_0.916667_g60764_i0 PRJNA841653 61438 241 0.916667 2.20916747 Polysphondylium violaceum 133409 Evosea other_Eukaryota 55.1 1.61e-6   NR KAF2071646.1 133409 g60764 i0 37.7 0.95850622406639 77 43 89.6 1 23 238 123 199 KAF2071646.1 hypothetical protein CYY_007039 [Polysphondylium violaceum] diamond 231 55.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
32394330 32394330 PRJNA841653_P_NODE_62319_length_241_cov_0.916667_g61645_i0 PRJNA841653 62319 241 0.916667 2.20916747 Cavenderia fasciculata 261658 Evosea other_Eukaryota 61.6 8.25e-9   NR XP_004359939.1 261658 g61645 i0 41.7 1.54356846473029 60 32 71 1 49 219 912 971 XP_004359939.1 putative guanine nucleotide exchange factor [Cavenderia fasciculata] diamond 372 61.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;