RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA841653" and tax_phylum = "Candidatus Binatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA841653 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5934066 5934066 PRJNA841653_P_NODE_56045_length_244_cov_0.900585_g55371_i0 PRJNA841653 56045 244 0.900585 2.1974274 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 185 2.0799999999999994e-42   NTclustered gi|2621703606|emb|OY761465.1| 2838779 g55371 i0 80.579 19.172131147541 242 45 99 2 4 244 793087 792847 MAG: Candidatus Binatia bacterium isolate d3e24e22-6b5b-4867-8422-75782eed2520 genome assembly, chromosome: 1 blastn 4678 185 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30149288 30149288 PRJNA841653_P_NODE_32712_length_286_cov_1.061033_g32038_i0 PRJNA841653 32712 286 1.061033 3.03455438 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 58.2 2.31e-7   NR HEV8717621.1 2838779 g32038 i0 69.8 0.944055944055944 43 13 45.1 0 269 141 508 550 HEV8717621.1 CARDB domain-containing protein [Candidatus Binatia bacterium] diamond 270 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31191798 31191798 PRJNA841653_P_NODE_44895_length_250_cov_1.305085_g44221_i0 PRJNA841653 44895 250 1.305085 3.2627125 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 160 6.23e-47   NR HEX9788018.1 2838779 g44221 i0 92.2 0.924 77 6 92.4 0 245 15 202 278 HEX9788018.1 hypothetical protein [Candidatus Binatia bacterium] diamond 231 160 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;