RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA841653", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 9 ✖

tax_kingdom 1

  • Metazoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA841653 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23782825 23782825 PRJNA841653_P_NODE_36059_length_274_cov_1.149254_g35385_i0 PRJNA841653 36059 274 1.149254 3.14895596 Metazoa 33208 Nematoda Nematoda 153 5.939999999999999e-46   NR VDN00697.1 42157 g35385 i0 79.5 21.3394160583942 88 18 96.4 0 7 270 1 88 VDN00697.1 unnamed protein product, partial [Onchocerca ochengi] diamond 5847 154 0.993506493506494 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Onchocerca Onchocerca ochengi
28602282 28602282 PRJNA841653_P_NODE_57347_length_243_cov_1.358824_g56673_i0 PRJNA841653 57347 243 1.358824 3.30194232 Meloidogyne enterolobii 390850 Nematoda Nematoda 64.3 5.87e-10   NR CAK5082118.1 390850 g56673 i0 41.3 7.90123456790123 80 47 98.8 0 240 1 116 195 CAK5082118.1 unnamed protein product [Meloidogyne enterolobii] diamond 1920 64.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
28728491 28728491 PRJNA841653_P_NODE_34087_length_281_cov_1.110577_g33413_i0 PRJNA841653 34087 281 1.110577 3.12072137 Mesorhabditis spiculigera 96644 Nematoda Nematoda 48.5 4.45e-4   NR CAJ0580483.1 96644 g33413 i0 39 1.68683274021352 77 42 80.1 3 281 57 23 96 CAJ0580483.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 474 48.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
29075954 29075954 PRJNA841653_P_NODE_46828_length_249_cov_0.875000_g46154_i0 PRJNA841653 46828 249 0.875 2.17875 Meloidogyne enterolobii 390850 Nematoda Nematoda 43.1 0.0287   NR CAD2197126.1 390850 g46154 i0 43.4 0.63855421686747 53 28 61.4 1 15 167 323 375 CAD2197126.1 unnamed protein product [Meloidogyne enterolobii] diamond 159 43.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
29580644 29580644 PRJNA841653_P_NODE_32750_length_285_cov_4.259434_g32076_i0 PRJNA841653 32750 285 4.259434 12.1393869 Steinernema carpocapsae 34508 Nematoda Nematoda 43.1 0.0176   NR TKR77732.1 34508 g32076 i0 47.7 0.463157894736842 44 23 46.3 0 253 122 4 47 TKR77732.1 hypothetical protein L596_018650 [Steinernema carpocapsae] diamond 132 43.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
30695007 30695007 PRJNA841653_P_NODE_54313_length_245_cov_0.895349_g53639_i0 PRJNA841653 54313 245 0.895349 2.19360505 Rhabditida 6236 Nematoda Nematoda 54.3 1.09e-6   NR VDP39558.1 6339 g53639 i0 70.6 4.99591836734694 34 10 41.6 0 51 152 64 97 VDP39558.1 unnamed protein product [Heligmosomoides polygyrus] diamond 1224 54.7 0.992687385740402 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Heligmosomoides Heligmosomoides polygyrus
31603405 31603405 PRJNA841653_P_NODE_58436_length_243_cov_0.905882_g57762_i0 PRJNA841653 58436 243 0.905882 2.20129326 Cylicocyclus nassatus 53992 Nematoda Nematoda 45.1 0.00566   NR CAJ0596641.1 53992 g57762 i0 32.8 0.790123456790123 64 38 74.1 2 57 236 703 765 CAJ0596641.1 unnamed protein product [Cylicocyclus nassatus] diamond 192 45.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongylidae Cylicocyclus Cylicocyclus nassatus
32299658 32299658 PRJNA841653_P_NODE_26019_length_320_cov_1.202429_g25345_i0 PRJNA841653 26019 320 1.202429 3.8477728 Pristionchus fissidentatus 1538716 Nematoda Nematoda 128 5.1999999999999994e-36   NR GMT14341.1 1538716 g25345 i0 65.6 1.734375 93 31 87.2 1 316 38 7 98 GMT14341.1 hypothetical protein PFISCL1PPCAC_5638, partial [Pristionchus fissidentatus] diamond 555 128 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
32331329 32331329 PRJNA841653_P_NODE_15979_length_410_cov_3.305638_g15307_i0 PRJNA841653 15979 410 3.305638 13.5531158 Pristionchus fissidentatus 1538716 Nematoda Nematoda 88.6 1.43e-19   NR GMT18625.1 1538716 g15307 i0 40.8 0.951219512195122 130 70 94.4 3 24 410 1 124 GMT18625.1 hypothetical protein PFISCL1PPCAC_9922 [Pristionchus fissidentatus] diamond 390 88.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;