RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA841653", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA841653 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10159301 10159301 PRJNA841653_P_NODE_39528_length_262_cov_1.883598_g38854_i0 PRJNA841653 39528 262 1.883598 4.93502676 Opisthokonta 33154 Hemichordata other_Eukaryota 139 1.3799999999999999e-38   NR XP_070567525.1 63121 g38854 i0 75.9 14.3358778625954 83 20 95 0 2 250 174 256 XP_070567525.1 small ribosomal subunit protein eS4 [Ptychodera flava] diamond 3756 139 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
27844211 27844211 PRJNA841653_P_NODE_56744_length_244_cov_0.900585_g56070_i0 PRJNA841653 56744 244 0.900585 2.1974274 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 49.7 1.31e-4   NR XP_006823735.1 10224 g56070 i0 39.7 0.713114754098361 58 35 71.3 0 9 182 616 673 XP_006823735.1 PREDICTED: leukocyte receptor cluster member 8 homolog [Saccoglossus kowalevskii] diamond 174 49.7 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
32584166 32584166 PRJNA841653_P_NODE_41179_length_257_cov_1.407609_g40505_i0 PRJNA841653 41179 257 1.407609 3.61755513 Ptychodera flava 63121 Hemichordata other_Eukaryota 74.3 1.83e-14   NR XP_070568554.1 63121 g40505 i0 70.7 1.35408560311284 58 17 67.7 0 252 79 61 118 XP_070568554.1 large ribosomal subunit protein eL24-like [Ptychodera flava] diamond 348 74.3 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;