RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA841653", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA841653 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13984511 13984511 PRJNA841653_P_NODE_29491_length_300_cov_1.334802_g28817_i0 PRJNA841653 29491 300 1.334802 4.004406 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 119 4.58e-31   NR KAF4701312.1 32597 g28817 i0 93.3 6 60 4 60 0 119 298 97 156 KAF4701312.1 AAA ATPase, CDC48 sub, partial [Perkinsus olseni] diamond 1800 120 0.991666666666667 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
19956640 19956640 PRJNA841653_P_NODE_21336_length_353_cov_1.182143_g20662_i0 PRJNA841653 21336 353 1.182143 4.17296479 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 146 9.1e-40   NR KAF4739263.1 32597 g20662 i0 61.5 23.5070821529745 117 41 96 2 8 346 257 373 KAF4739263.1 hypothetical protein FOZ63_025127 [Perkinsus olseni] diamond 8298 146 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;