RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA841653", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 1 ✖

tax_clade 1

  • Metamonada · 1 ✖

bioproject 1

  • PRJNA841653 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31002624 31002624 PRJNA841653_P_NODE_14154_length_438_cov_1.210959_g13483_i0 PRJNA841653 14154 438 1.210959 5.30400042 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 87.8 1.02e-18   NR KAG9392754.1 201153 g13483 i0 39 0.965753424657534 141 76 93.8 6 23 433 1 135 KAG9392754.1 Translationally controlled tumor protein [Carpediemonas membranifera] diamond 423 87.8 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;