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contig_metadata

9 rows where bioproject = "PRJNA841653", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 9 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 9 ✖

bioproject 1

  • PRJNA841653 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10159391 10159391 PRJNA841653_P_NODE_52508_length_246_cov_0.890173_g51834_i0 PRJNA841653 52508 246 0.890173 2.18982558 Rhodothermales bacterium 2306054 Bacteria Bacteria 148 5.779999999999998e-42   NR MEZ4700510.1 2306054 g51834 i0 93.7 2.89024390243902 79 5 96.3 0 245 9 160 238 MEZ4700510.1 N-acetylmuramic acid 6-phosphate etherase [Rhodothermales bacterium] diamond 711 148 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
28033990 28033990 PRJNA841653_P_NODE_58785_length_243_cov_0.905882_g58111_i0 PRJNA841653 58785 243 0.905882 2.20129326 Rhodothermales bacterium 2306054 Bacteria Bacteria 113 5.67e-28   NR MEZ4699196.1 2306054 g58111 i0 68.8 0.987654320987654 80 25 98.8 0 3 242 138 217 MEZ4699196.1 alkaline phosphatase [Rhodothermales bacterium] diamond 240 113 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
28444451 28444451 PRJNA841653_P_NODE_44606_length_251_cov_0.865169_g43932_i0 PRJNA841653 44606 251 0.865169 2.17157419 Rhodothermales bacterium 2306054 Bacteria Bacteria 55.1 6.69e-7   NR MDZ4702120.1 2306054 g43932 i0 59.1 1.05179282868526 44 18 52.6 0 249 118 136 179 MDZ4702120.1 NUDIX hydrolase [Rhodothermales bacterium] diamond 264 55.1 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
28634003 28634003 PRJNA841653_P_NODE_61207_length_241_cov_0.916667_g60533_i0 PRJNA841653 61207 241 0.916667 2.20916747 Rhodothermales bacterium 2306054 Bacteria Bacteria 144 2.69e-39   NR MFQ5568568.1 2306054 g60533 i0 87.3 0.983402489626556 79 10 98.3 0 238 2 62 140 MFQ5568568.1 exodeoxyribonuclease VII large subunit [Rhodothermales bacterium] diamond 237 144 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
28665466 28665466 PRJNA841653_P_NODE_62687_length_241_cov_0.916667_g62013_i0 PRJNA841653 62687 241 0.916667 2.20916747 Rhodothermales bacterium 2306054 Bacteria Bacteria 95.1 7.3e-21   NR MEX2399364.1 2306054 g62013 i0 57 1.96680497925311 79 32 98.3 1 3 239 151 227 MEX2399364.1 alanine racemase [Rhodothermales bacterium] diamond 474 95.1 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
28697089 28697089 PRJNA841653_P_NODE_61467_length_241_cov_0.916667_g60793_i0 PRJNA841653 61467 241 0.916667 2.20916747 Rhodothermales bacterium 2306054 Bacteria Bacteria 103 2.62e-25   NR MEZ4703057.1 2306054 g60793 i0 63.6 0.95850622406639 77 28 95.9 0 10 240 1 77 MEZ4703057.1 FAD-binding protein [Rhodothermales bacterium] diamond 231 103 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
29833531 29833531 PRJNA841653_P_NODE_42131_length_254_cov_1.646409_g41457_i0 PRJNA841653 42131 254 1.646409 4.18187886 Rhodothermales bacterium 2306054 Bacteria Bacteria 111 3.42e-26   NR MEZ4700083.1 2306054 g41457 i0 70.2 0.992125984251969 84 25 99.2 0 254 3 670 753 MEZ4700083.1 cohesin domain-containing protein [Rhodothermales bacterium] diamond 252 111 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
30465731 30465731 PRJNA841653_P_NODE_39293_length_263_cov_1.473684_g38619_i0 PRJNA841653 39293 263 1.473684 3.87578892 Rhodothermales bacterium 2306054 Bacteria Bacteria 143 2.41e-40   NR MEX0746524.1 2306054 g38619 i0 74.4 1.96197718631179 86 22 98.1 0 4 261 28 113 MEX0746524.1 6-phosphofructokinase [Rhodothermales bacterium] diamond 516 143 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
31761435 31761435 PRJNA841653_P_NODE_48777_length_248_cov_0.880000_g48103_i0 PRJNA841653 48777 248 0.88 2.1824 Rhodothermales bacterium 2306054 Bacteria Bacteria 76.3 6.41e-14   NR MEX0821082.1 2306054 g48103 i0 46.1 1.88709677419355 76 41 91.9 0 243 16 954 1029 MEX0821082.1 translocation/assembly module TamB domain-containing protein [Rhodothermales bacterium] diamond 468 76.3 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;