RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA841653", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA841653 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28002445 28002445 PRJNA841653_P_NODE_47705_length_249_cov_0.875000_g47031_i0 PRJNA841653 47705 249 0.875 2.17875 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 162 2.34e-44   NR MCU0427812.1 2447898 g47031 i0 98.8 0.963855421686747 80 1 96.4 0 8 247 713 792 MCU0427812.1 TonB-dependent receptor [Candidatus Kapaibacterium sp.] diamond 240 162 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31097238 31097238 PRJNA841653_P_NODE_39115_length_264_cov_1.157068_g38441_i0 PRJNA841653 39115 264 1.157068 3.05465952 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 70.1 9.23e-12   NR HVK40777.1 2447898 g38441 i0 51.6 1.03409090909091 91 38 96.6 3 256 2 11 101 HVK40777.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 273 70.1 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31951203 31951203 PRJNA841653_P_NODE_60977_length_241_cov_1.684524_g60303_i0 PRJNA841653 60977 241 1.684524 4.05970284 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 142 2.36e-37   NR MCU0426558.1 2447898 g60303 i0 87.2 0.970954356846473 78 10 97.1 0 6 239 37 114 MCU0426558.1 carboxypeptidase regulatory-like domain-containing protein [Candidatus Kapaibacterium sp.] diamond 234 142 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;