RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA841653", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA841653 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27117681 27117681 PRJNA841653_P_NODE_33782_length_282_cov_1.220096_g33108_i0 PRJNA841653 33782 282 1.220096 3.44067072 Minisyncoccota bacterium 2053589 Bacteria Bacteria 120 2.69e-29   NR HVX90885.1 2053589 g33108 i0 61.1 0.957446808510638 90 35 95.7 0 274 5 246 335 HVX90885.1 DNA methyltransferase [Candidatus Paceibacterota bacterium] diamond 270 120 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30718102 30718102 PRJNA841653_P_NODE_46154_length_250_cov_0.870056_g45480_i0 PRJNA841653 46154 250 0.870056 2.17514 Minisyncoccota bacterium 2053589 Bacteria Bacteria 135 3.84e-36   NR HLP75398.1 2053589 g45480 i0 86.8 0.912 76 10 91.2 0 232 5 1 76 HLP75398.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 228 135 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;