RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA839281" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA839281 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27244301 27244301 PRJNA839281_S_NODE_36823_length_161_cov_0.910714_g36554_i0 PRJNA839281 36823 161 0.910714 1.46624954 Ramicandelaber brevisporus 304332 Fungi Fungi 97.1 9.1e-22   NR KAI8867177.1 304332 g36554 i0 79.2 4.93788819875776 53 11 98.8 0 160 2 492 544 KAI8867177.1 FTHFS-domain-containing protein [Ramicandelaber brevisporus] diamond 795 97.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota   Ramicandelaberales Ramicandelaberaceae Ramicandelaber Ramicandelaber brevisporus
28223091 28223091 PRJNA839281_S_NODE_24006_length_173_cov_1.645161_g23737_i0 PRJNA839281 24006 173 1.645161 2.84612853 Spiromyces aspiralis 68401 Fungi Fungi 68.9 5.34e-12   NR KAJ1675405.1 68401 g23737 i0 64.8 3.79768786127168 54 19 93.6 0 5 166 157 210 KAJ1675405.1 hypothetical protein EV182_001334 [Spiromyces aspiralis] diamond 657 68.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Spiromyces Spiromyces aspiralis
30316459 30316459 PRJNA839281_S_NODE_39232_length_153_cov_2.490385_g38963_i0 PRJNA839281 39232 153 2.490385 3.81028905 Eukaryota 2759 Fungi Fungi 85.9 8.32e-20   NR PVV01210.1 133381 g38963 i0 74 6.88235294117647 50 13 98 0 4 153 1 50 PVV01210.1 hypothetical protein BB560_004384 [Smittium megazygosporum] diamond 1053 85.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Smittium Smittium megazygosporum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;