RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA839281" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA839281 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28002424 28002424 PRJNA839281_S_NODE_2865_length_756_cov_21.891089_g2628_i0 PRJNA839281 2865 756 21.891089 165.49663284 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 138 6.930000000000001e-36   NR TEB19254.1 2494336 g2628 i0 38.6 1.00793650793651 254 126 89.7 7 680 3 5 256 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 762 138 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
31856244 31856244 PRJNA839281_S_NODE_2457_length_927_cov_11.143508_g2242_i0 PRJNA839281 2457 927 11.143508 103.30031916 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 161 4.41e-44   NR TEB19254.1 2494336 g2242 i0 39.4 0.854368932038835 264 144 81.2 4 851 99 3 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 792 161 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;