RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA839281" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA839281 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28791461 28791461 PRJNA839281_S_NODE_38027_length_161_cov_0.910714_g37758_i0 PRJNA839281 38027 161 0.910714 1.46624954 Spiroplasma platyhelix 301585 Bacteria Bacteria 74.7 1.08e-14   NR WP_168104851.1 301585 g37758 i0 69.2 0.968944099378882 52 16 96.9 0 157 2 133 184 WP_168104851.1 nitroreductase family protein [Spiroplasma platyhelix] diamond 156 74.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma platyhelix
31382003 31382003 PRJNA839281_S_NODE_29116_length_166_cov_0.871795_g28847_i0 PRJNA839281 29116 166 0.871795 1.4471797 Acholeplasmatales bacterium 2053494 Bacteria Bacteria 68.2 1.36e-11   NR MBQ9124792.1 2053494 g28847 i0 63.6 0.993975903614458 55 17 94 1 164 9 323 377 MBQ9124792.1 pyruvate, phosphate dikinase [Acholeplasmatales bacterium] diamond 165 68.2 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales     Acholeplasmatales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;