RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA839281" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA839281 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2105170 2105170 PRJNA839281_S_NODE_2722_length_811_cov_2.914698_g2488_i0 PRJNA839281 2722 811 2.914698 23.63820078 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.023   NTclustered gi|916414171|ref|XM_013372863.1| 5802 g2488 i0 96.875 0.0394574599260173 32 1 4 0 186 217 1992 2023 Eimeria tenella uncharacterized protein (ETH_00030875), partial mRNA blastn 32 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
14857649 14857649 PRJNA839281_S_NODE_27272_length_167_cov_0.864407_g27003_i0 PRJNA839281 27272 167 0.864407 1.44355969 Cryptosporidium muris 5808 SAR_Eukaryotes SAR_Eukaryotes 303 3.5e-78   NTclustered gi|209883104|ref|XM_002142938.1| 441375 g27003 i0 99.401 1 167 1 100 0 1 167 517 683 Cryptosporidium muris RN66 uncharacterized protein (CMU_004200), partial mRNA blastn 167 303 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
27497157 27497157 PRJNA839281_S_NODE_35623_length_162_cov_0.902655_g35354_i0 PRJNA839281 35623 162 0.902655 1.4623011 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 41.6 0.0264   NR KAF8823063.1 476202 g35354 i0 55.3 0.703703703703704 38 14 70.4 1 8 121 47 81 KAF8823063.1 hypothetical protein IE077_000985, partial [Cardiosporidium cionae] diamond 114 41.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;